STRINGSTRING
BPSL2705 BPSL2705 BPSL2704 BPSL2704 BPSL2706 BPSL2706 BPSL2703 BPSL2703
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL2705Putative lipoprotein; No significant database matches. (417 aa)    
Predicted Functional Partners:
BPSL2704
Putative OmpW-family exported protein; Similar in part to Ralstonia solanacearum putative outer membrane Wsignal peptide protein OmpW or rsc3350 or rs02625 SWALL:Q8XU43 (EMBL:AL646074) (241 aa) fasta scores: E(): 0.00076, 34.67% id in 274 aa.
       0.773
BPSL2706
Putative lipoprotein; Weakly similar to Ralstonia solanacearum putative lipoprotein rsp0116 or rs03006 SWALL:Q8XTJ2 (EMBL:AL646076) (427 aa) fasta scores: E(): 0.00043, 25.05% id in 439 aa.
      
0.596
BPSL2703
Putative exported protein; Similar to Pseudomonas fluorescens protein activator of alkane oxidation PraB SWALL:Q9AE74 (EMBL:AJ009579) (168 aa) fasta scores: E(): 1.8e-07, 30.67% id in 163 aa and to Pseudomonas aeruginosa protein activator precursor Pra or pa4590 SWALL:Q51428 (EMBL:L08966) (162 aa) fasta scores: E(): 2.8e-06, 30.28% id in 175 aa.
       0.509
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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