STRINGSTRING
BPSL2749 BPSL2749 BPSL2750 BPSL2750 BPSL1828 BPSL1828 BPSL2863 BPSL2863 BPSL1246 BPSL1246 BPSL1449 BPSL1449 BPSL2989 BPSL2989 BPSS1846 BPSS1846 BPSS2243 BPSS2243 BPSL1826 BPSL1826 BPSL2755 BPSL2755
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL2749Putative membrane protein; Similar to several including: Ralstonia solanacearum probable transmembrane protein rsc0753 or rs05100 SWALL:Q8Y1D7 (EMBL:AL646060) (108 aa) fasta scores: E(): 1e-21, 70.1% id in 97 aa and Pseudomonas aeruginosa hypothetical protein Pa3040 pa3040 SWALL:Q9HZG8 (EMBL:AE004729) (109 aa) fasta scores: E(): 1.6e-09, 43.43% id in 99 aa. (100 aa)    
Predicted Functional Partners:
BPSL2750
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc0752 or rs05101 SWALL:Q8Y1D8 (EMBL:AL646060) (125 aa) fasta scores: E(): 6.6e-25, 62.5% id in 112 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3041 SWALL:Q9HZG7 (EMBL:AE004729) (126 aa) fasta scores: E(): 1.6e-10, 38.52% id in 122 aa.
 
  
 0.970
BPSL1828
Similar to Pseudomonas aeruginosa hypothetical protein pa0588 SWALL:Q9I5U9 (EMBL:AE004495) (640 aa) fasta scores: E(): 1.2e-195, 79.03% id in 639 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YeaG or b1783 or z2823 or ecs2492 SWALL:YEAG_ECOLI (SWALL:P77391) (644 aa) fasta scores: E(): 3.9e-189, 75.15% id in 644 aa.
   
    0.758
BPSL2863
Putative ferritin DPS-family DNA binding protein; Similar to Bacillus anthracis miniferritin Dlp1 SWALL:Q8RPQ2 (EMBL:AF374268) (146 aa) fasta scores: E(): 3e-13, 38.73% id in 142 aa, and to Ralstonia solanacearum putative DNA protection during starvation or oxidative stress transcription regulator protein DPS or rsc2687 or rs00034 SWALL:Q8XVY8 (EMBL:AL646071) (166 aa) fasta scores: E(): 1.6e-48, 79.51% id in 166 aa, and to Anabaena sp. hypothetical protein All4145 SWALL:Q8YPP7 (EMBL:AP003595) (163 aa) fasta scores: E(): 1.3e-44, 77.01% id in 161 aa.
  
    0.749
BPSL1246
Similar to Ralstonia solanacearum hypothetical protein rsc2005 or rs03573 SWALL:Q8XXV8 (EMBL:AL646067) (403 aa) fasta scores: E(): 1.2e-83, 52.97% id in 404 aa.
  
     0.729
BPSL1449
Similar to Ralstonia solanacearum hypothetical protein rsc2148 or rs01455 SWALL:Q8XXG6 (EMBL:AL646068) (160 aa) fasta scores: E(): 5e-19, 46.25% id in 160 aa, and to Escherichia coli unknown protein from 2D-PAGE YgaU or b2665 SWALL:UP04_ECOLI (SWALL:P39169) (148 aa) fasta scores: E(): 1.1e-12, 37.73% id in 159 aa.
   
  
 0.695
BPSL2989
Putative lipoprotein; Similar to Yersinia enterocolitica outer membrane lipoprotein precursor Pcp or PcpY SWALL:PCP_YEREN (SWALL:P31484) (155 aa) fasta scores: E(): 2.4e-12, 40.94% id in 149 aa, and to Escherichia coli, and Escherichia coli O157:H7 outer membrane lipoprotein slyb precursor SlyB or b1641 or z2655 or ecs2350 SWALL:SLYB_ECOLI (SWALL:P55741) (155 aa) fasta scores: E(): 1.3e-10, 36.87% id in 141 aa.
  
    0.654
BPSS1846
Putative membrane protein; Low similarity to Yersinia pestis putative membrane protein ypo0570 or y3609 SWALL:Q8ZID5 (EMBL:AJ414143) (101 aa) fasta scores: E(): 0.0024, 30.43% id in 92 aa, and to Pseudomonas aeruginosa hypothetical protein pa2754 SWALL:Q9I089 (EMBL:AE004703) (109 aa) fasta scores: E(): 0.021, 28.7% id in 108 aa.
  
  
 0.647
BPSS2243
Putative lipoprotein; No significant database matches.
 
    0.598
BPSL1826
Similar to Pseudomonas aeruginosa hypothetical protein pa0586 SWALL:Q9I5V1 (EMBL:AE004494) (517 aa) fasta scores: E(): 1.3e-141, 67.69% id in 486 aa, and to Escherichia coli hypothetical protein YcgB or b1188 SWALL:YCGB_ECOLI (SWALL:P29013) (510 aa) fasta scores: E(): 8.4e-137, 64.12% id in 499 aa.
   
    0.587
BPSL2755
Putative exported protein; No significant database matches.
      
 0.578
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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