STRINGSTRING
BPSL2874 BPSL2874 BPSL2875 BPSL2875 BPSL2876 BPSL2876 BPSS1024 BPSS1024 BPSL2873 BPSL2873 BPSS1340 BPSS1340
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL2874Putative exported protein; Similar to Ralstonia solanacearum probable signal peptide protein rsc2717 or rs00005 SWALL:Q8XVW0 (EMBL:AL646071) (198 aa) fasta scores: E(): 5.8e-48, 65.26% id in 190 aa, and to Salmonella typhi putative exported protein sty1443 SWALL:Q8Z764 (EMBL:AL627270) (191 aa) fasta scores: E(): 4.7e-18, 36.59% id in 194 aa; Belongs to the UPF0312 family. (192 aa)    
Predicted Functional Partners:
BPSL2875
Putative exported protein; Similar to Ralstonia solanacearum probable signal peptide protein rsc2718 or rs00003 SWALL:Q8XVV9 (EMBL:AL646071) (189 aa) fasta scores: E(): 1.9e-32, 53.51% id in 185 aa, and to Xanthomonas axonopodis hypothetical protein xac3034 SWALL:AAM37879 (EMBL:AE011945) (189 aa) fasta scores: E(): 7.4e-10, 32% id in 175 aa; Belongs to the UPF0312 family.
 
     0.909
BPSL2876
Similar to Ralstonia solanacearum putative cytochrome b-561 transmembrane protein rsc2719 or rs00083 SWALL:Q8XVV8 (EMBL:AL646071) (195 aa) fasta scores: E(): 5.8e-36, 55.08% id in 187 aa, and to Xanthomonas campestris cytochrome b561 xcc2850 SWALL:Q8P6W5 (EMBL:AE012398) (187 aa) fasta scores: E(): 8.8e-20, 41.56% id in 166 aa.
 
  
 0.824
BPSS1024
Putative exported protein; Similar to Caulobacter crescentus hypothetical protein Cc2609 SWALL:Q9A555 (EMBL:AE005928) (230 aa) fasta scores: E(): 9.1e-08, 34.61% id in 156 aa, and to Caulobacter crescentus hypothetical protein Cc3392 SWALL:Q9A314 (EMBL:AE005999) (213 aa) fasta scores: E(): 3.3e-06, 30.35% id in 168 aa, and to Streptomyces coelicolor hypothetical protein sco2566 or scc123.04C SWALL:Q9RDM0 (EMBL:AL939113) (293 aa) fasta scores: E(): 3.8e-06, 30.34% id in 145 aa; Belongs to the UPF0312 family.
  
     0.746
BPSL2873
Putative membrane protein; Similar to Ralstonia solanacearum probable sugar-proton symporter transmembrane protein rsp0536 or rs00416 SWALL:Q8XSE0 (EMBL:AL646079) (441 aa) fasta scores: E(): 1.2e-21, 43.13% id in 204 aa, and to the C-terminal region of Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 1.2e-14, 35.02% id in 177 aa.
       0.527
BPSS1340
Similar to Escherichia coli, and Shigella flexneri cytochrome b561 CybB or b1418 or sf1794 SWALL:C561_ECOLI (SWALL:P08732) (176 aa) fasta scores: E(): 1.3e-07, 26.59% id in 173 aa, and to Xanthomonas axonopodis cytochrome like b561 xac1686 SWALL:AAM36553 (EMBL:AE011801) (173 aa) fasta scores: E(): 2.8e-12, 34.54% id in 165 aa, and to Rhizobium loti cytochrome b561 mlr4647 SWALL:Q98DL7 (EMBL:AP003004) (179 aa) fasta scores: E(): 1.1e-11, 32.35% id in 170 aa.
 
  
 0.461
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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