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BPSL2989 BPSL2989 BPSL2988 BPSL2988 BPSL2750 BPSL2750 BPSL2749 BPSL2749 tpx tpx BPSS1679 BPSS1679 waaF waaF BPSL0294 BPSL0294 bamA bamA BPSL1913 BPSL1913 BPSL2003 BPSL2003
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
BPSL2989Putative lipoprotein; Similar to Yersinia enterocolitica outer membrane lipoprotein precursor Pcp or PcpY SWALL:PCP_YEREN (SWALL:P31484) (155 aa) fasta scores: E(): 2.4e-12, 40.94% id in 149 aa, and to Escherichia coli, and Escherichia coli O157:H7 outer membrane lipoprotein slyb precursor SlyB or b1641 or z2655 or ecs2350 SWALL:SLYB_ECOLI (SWALL:P55741) (155 aa) fasta scores: E(): 1.3e-10, 36.87% id in 141 aa. (157 aa)    
Predicted Functional Partners:
BPSL2988
Putative sugar kinase; Similar to Bacillus subtilis ribokinase RbsK SWALL:RBSK_BACSU (SWALL:P36945) (293 aa) fasta scores: E(): 7.6e-08, 26.33% id in 262 aa, and to Ralstonia solanacearum putative sugar kinase transferase protein rsc2791 or rs00056 SWALL:Q8XVN9 (EMBL:AL646071) (311 aa) fasta scores: E(): 3.9e-78, 64.19% id in 310 aa.
       0.719
BPSL2750
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc0752 or rs05101 SWALL:Q8Y1D8 (EMBL:AL646060) (125 aa) fasta scores: E(): 6.6e-25, 62.5% id in 112 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3041 SWALL:Q9HZG7 (EMBL:AE004729) (126 aa) fasta scores: E(): 1.6e-10, 38.52% id in 122 aa.
  
  
 0.668
BPSL2749
Putative membrane protein; Similar to several including: Ralstonia solanacearum probable transmembrane protein rsc0753 or rs05100 SWALL:Q8Y1D7 (EMBL:AL646060) (108 aa) fasta scores: E(): 1e-21, 70.1% id in 97 aa and Pseudomonas aeruginosa hypothetical protein Pa3040 pa3040 SWALL:Q9HZG8 (EMBL:AE004729) (109 aa) fasta scores: E(): 1.6e-09, 43.43% id in 99 aa.
  
    0.654
tpx
Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
  
  
 0.592
BPSS1679
Putative porin related exported protein; Similar to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 6.7e-44, 44.33% id in 406 aa, and to Alcaligenes eutrophus hypothetical 40.6 kDa protein in gbd 3'region precursor SWALL:Q44021 (EMBL:L36817) (390 aa) fasta scores: E(): 1.4e-36, 42.71% id in 391 aa.
  
   
 0.562
waaF
Putative ADP-heptose--LPS heptosyltransferase II; Previously sequenced as Burkholderia pseudomallei heptosyl transferase WaaF SWALL:Q9ZFN3 (EMBL:AF097748) (346 aa) fasta scores: E(): 6.5e-139, 99.42% id in 346 aa. Similar to Escherichia coli ADP-heptose--LPS heptosyltransferase II RfaF or Waaf SWALL:RFAF_ECOLI (SWALL:P37692) (348 aa) fasta scores: E(): 1.8e-49, 44.03% id in 352 aa.
  
     0.516
BPSL0294
Putative exported protein; C-terminal region is similar to Pseudomonas aeruginosa porin B precursor OprB SWALL:PORB_PSEAE (SWALL:Q51485) (454 aa) fasta scores: E(): 3.1e-09, 27.09% id in 465 aa, and to Ralstonia solanacearum putative porin B precursor rsp1632 or rs02190 SWALL:Q8XPK8 (EMBL:AL646086) (456 aa) fasta scores: E(): 4.4e-08, 29.29% id in 471 aa. Possible alternative translational start site.
      
 0.510
bamA
Putative outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.500
BPSL1913
Putative exported protein; Similar to Ralstonia solanacearum putative outer membrane chanel lipoprotein rsc1294 or rs02807 SWALL:Q8XZV1 (EMBL:AL646063) (489 aa) fasta scores: E(): 1.9e-77, 48.72% id in 470 aa, and to Xanthomonas axonopodis outer membrane efflux protein YjcP or xac1444 SWALL:AAM36315 (EMBL:AE011776) (496 aa) fasta scores: E(): 6.1e-56, 38.46% id in 481 aa.
      
 0.499
BPSL2003
Similar to Sulfolobus tokodaii hypothetical protein st1080 SWALL:Q972Q3 (EMBL:AP000984) (114 aa) fasta scores: E(): 1.5e-14, 44.76% id in 105 aa, and to Thermotoga maritima hypothetical protein tm0763 SWALL:Y763_THEMA (SWALL:Q9WZM2) (106 aa) fasta scores: E(): 4.3e-13, 44.55% id in 101 aa; Belongs to the UPF0145 family.
      
 0.499
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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