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paaG paaG paaA-2 paaA-2 paaD paaD paaC paaC paaB paaB paaF paaF paaE paaE BPSL0391 BPSL0391 paaJ paaJ paaI paaI BPSS0617 BPSS0617
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaGSimilar to Escherichia coli probable enoyl-CoA hydratase PaaG or b1394 SWALL:PAAG_ECOLI (SWALL:P77467) (262 aa) fasta scores: E(): 2.3e-50, 58% id in 250 aa. (263 aa)    
Predicted Functional Partners:
paaA-2
Similar to Escherichia coli phenylacetic acid degradation protein PaaA or b1388 SWALL:PAAA_ECOLI (SWALL:P76077) (309 aa) fasta scores: E(): 8.6e-88, 66% id in 300 aa.
 
 
 0.972
paaD
Similar to Escherichia coli phenylacetic acid degradation protein PaaD or b1391 SWALL:PAAD_ECOLI (SWALL:P76080) (167 aa) fasta scores: E(): 1.1e-15, 49.12% id in 171 aa.
 
 
 0.972
paaC
Similar to Escherichia coli phenylacetic acid degradation protein PaaC or b1390 SWALL:PAAC_ECOLI (SWALL:P76079) (248 aa) fasta scores: E(): 5e-21, 43.51% id in 262 aa.
 
 
 0.971
paaB
Similar to Escherichia coli phenylacetic acid degradation protein PaaB or b1389 SWALL:PAAB_ECOLI (SWALL:P76078) (95 aa) fasta scores: E(): 7.3e-24, 64.51% id in 93 aa.
 
 
 0.960
paaF
Putative phenylacetic acid degradation enoyl-CoA hydratase PaaF; Similar to Escherichia coli probable enoyl-CoA hydratase PaaF or b1393 SWALL:PAAF_ECOLI (SWALL:P76082) (255 aa) fasta scores: E(): 4.2e-36, 44.66% id in 253 aa; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.957
paaE
Similar to Escherichia coli probable phenylacetic acid degradation NADH oxidoreductase PaaE or b1392 SWALL:PAAE_ECOLI (SWALL:P76081) (356 aa) fasta scores: E(): 1.9e-58, 47.05% id in 357 aa.
 
 
 0.946
BPSL0391
enoyl-CoA hydratase/isomerase family protein; Similar to Escherichia coli probable enoyl-CoA hydratase PaaG SWALL:PAAG_ECOLI (SWALL:P77467) (262 aa) fasta scores: E(): 1e-14, 30.8% id in 237 aa, and to Ralstonia solanacearum probable enoyl-CoA hydratase protein rsc0304 or rs03271 SWALL:Q8Y2N1 (EMBL:AL646058) (272 aa) fasta scores: E(): 2e-75, 74.26% id in 272 aa; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 
0.925
paaJ
Similar to Escherichia coli probable beta-ketoadipyl CoA thiolase PaaJ or b1397 SWALL:PAAJ_ECOLI (SWALL:P77525) (401 aa) fasta scores: E(): 2.1e-101, 68.32% id in 401 aa, and to Pseudomonas putida beta-ketoadipyl CoA thiolase PcaF SWALL:PCAF_PSEPU (SWALL:Q51956) (400 aa) fasta scores: E(): 2.8e-106, 73.56% id in 401 aa; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.890
paaI
Similar to Escherichia coli phenylacetic acid degradation protein PaaI or b1396 SWALL:PAAI_ECOLI (SWALL:P76084) (140 aa) fasta scores: E(): 1.2e-22, 48.8% id in 125 aa.
 
 
 0.829
BPSS0617
acyl-CoA dehydrogenase; Similar to the C-terminal region of Homo sapiens acyl-CoA dehydrogenase, short-chain specific, mitochondrial precursor ACSDS SWALL:ACDS_HUMAN (SWALL:P16219) (412 aa) fasta scores: E(): 5.4e-64, 48.51% id in 371 aa, and to the full length Ralstonia solanacearum probable acyl-CoA dehydrogenase oxidoreductase protein rsp0652 or rs05570 SWALL:Q8XS29 (EMBL:AL646080) (377 aa) fasta scores: E(): 2.2e-119, 79.57% id in 377 aa.
 
 0.789
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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