STRINGSTRING
BPSL3098 BPSL3098 BPSL3097 BPSL3097 BPSL3099 BPSL3099 BPSL3096 BPSL3096 BPSL3111 BPSL3111 BPSL3104 BPSL3104 BPSL3109 BPSL3109 BPSL3103 BPSL3103 BPSL3102 BPSL3102 BPSL3105 BPSL3105 BPSL3110 BPSL3110
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL3098Similar to Ralstonia solanacearum hypothetical protein Rsp0762 or Rs01946 SWALL:Q8XRR9 (EMBL:AL646080) (328 aa) fasta scores: E(): 3.3e-81, 61.28% id in 328 aa. (329 aa)    
Predicted Functional Partners:
BPSL3097
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein Rsp0763 or Rs01945 SWALL:Q8XRR8 (EMBL:AL646080) (1313 aa) fasta scores: E(): 2.1e-151, 70.59% id in 1306 aa, and to Rhizobium leguminosarum ImpL SWALL:Q93EC2 (EMBL:AF361470) (1158 aa) fasta scores: E(): 2.6e-34, 25.43% id in 1270 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciS protein SWALL:Q93IR7 (EMBL:AJ320483) (1289 aa) fasta scores: E(): 4.5e-13, 25.89% id in 1259 aa.
 
  
 0.957
BPSL3099
Putative outer membrane protein; Similar to Ralstonia solanacearum probable lipoprotein Rsp0761 or Rs01947 SWALL:Q8XRS0 (EMBL:AL646080) (277 aa) fasta scores: E(): 9.8e-51, 62.9% id in 275 aa, and to Bordetella avium outer membrane protein A precursor OmpA SWALL:OMPA_BORAV (SWALL:Q05146) (194 aa) fasta scores: E(): 1.8e-07, 44.89% id in 98 aa.
 
  
 0.952
BPSL3096
Putative bacteriophage-related peptidase; Similar to Bacteriophage A500 L-alanyl-D-glutamate peptidase Ply or Ply500 SWALL:AEPE_BPA50 (SWALL:Q37979) (289 aa) fasta scores: E(): 0.001, 35.78% id in 109 aa, and to Listeria innocua phagelysin Cply2438 SWALL:Q48583 (EMBL:X89234) (287 aa) fasta scores: E(): 0.0019, 34.86% id in 109 aa.
 
   
 0.878
BPSL3111
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein Rsp0739 or Rs01969 SWALL:Q8XRU2 (EMBL:AL646080) (263 aa) fasta scores: E(): 2.7e-70, 64.98% id in 257 aa.
 
  
 0.852
BPSL3104
Similar to Ralstonia solanacearum hypothetical protein Rsp0746 or Rs01962 SWALL:Q8XRT5 (EMBL:AL646080) (157 aa) fasta scores: E(): 1.4e-42, 71.79% id in 156 aa.
 
  
 0.819
BPSL3109
Putative lipoprotein; Similar to Ralstonia solanacearum putative transmembrane protein Rsp0741 or Rs01967 SWALL:Q8XRU0 (EMBL:AL646080) (193 aa) fasta scores: E(): 3.9e-40, 59.16% id in 191 aa.
 
    0.808
BPSL3103
Similar to Ralstonia solanacearum hypothetical protein Rsp0747 or Rs01961 SWALL:Q8XRT4 (EMBL:AL646080) (616 aa) fasta scores: E(): 1.2e-156, 60.72% id in 611 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciC protein SWALL:Q93IT3 (EMBL:AJ320483) (627 aa) fasta scores: E(): 6e-31, 30.15% id in 630 aa.
 
    0.803
BPSL3102
Similar to Ralstonia solanacearum hypothetical protein Rsp0748 or Rs01960 SWALL:Q8XRT3 (EMBL:AL646080) (363 aa) fasta scores: E(): 4.5e-83, 57.33% id in 368 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciB protein SWALL:Q93IT4 (EMBL:AJ320483) (291 aa) fasta scores: E(): 1.6e-17, 30.07% id in 256 aa.
 
    0.802
BPSL3105
Similar to Ralstonia solanacearum hypothetical protein Rsp0745 or Rs01963 SWALL:Q8XRT6 (EMBL:AL646080) (167 aa) fasta scores: E(): 3.7e-49, 72.45% id in 167 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2367 SWALL:Q9I1B2 (EMBL:AE004663) (165 aa) fasta scores: E(): 1.1e-11, 32.91% id in 158 aa.
 
  
 0.802
BPSL3110
Similar to Ralstonia solanacearum hypothetical protein Rsp0740 or Rs01968 SWALL:Q8XRU1 (EMBL:AL646080) (448 aa) fasta scores: E(): 3.8e-135, 73.66% id in 448 aa, and to Rhizobium leguminosarum ImpJ SWALL:Q93EC4 (EMBL:AF361470) (446 aa) fasta scores: E(): 8.8e-32, 29.13% id in 460 aa.
 
  
 0.801
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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