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BPSL3099 BPSL3099 BPSL3098 BPSL3098 BPSL3097 BPSL3097 BPSL3096 BPSL3096 BPSL3109 BPSL3109 BPSL3111 BPSL3111 BPSL3104 BPSL3104 BPSL3105 BPSL3105 BPSS0078 BPSS0078 BPSL3110 BPSL3110 BPSS1213 BPSS1213
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL3099Putative outer membrane protein; Similar to Ralstonia solanacearum probable lipoprotein Rsp0761 or Rs01947 SWALL:Q8XRS0 (EMBL:AL646080) (277 aa) fasta scores: E(): 9.8e-51, 62.9% id in 275 aa, and to Bordetella avium outer membrane protein A precursor OmpA SWALL:OMPA_BORAV (SWALL:Q05146) (194 aa) fasta scores: E(): 1.8e-07, 44.89% id in 98 aa. (310 aa)    
Predicted Functional Partners:
BPSL3098
Similar to Ralstonia solanacearum hypothetical protein Rsp0762 or Rs01946 SWALL:Q8XRR9 (EMBL:AL646080) (328 aa) fasta scores: E(): 3.3e-81, 61.28% id in 328 aa.
 
  
 0.952
BPSL3097
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein Rsp0763 or Rs01945 SWALL:Q8XRR8 (EMBL:AL646080) (1313 aa) fasta scores: E(): 2.1e-151, 70.59% id in 1306 aa, and to Rhizobium leguminosarum ImpL SWALL:Q93EC2 (EMBL:AF361470) (1158 aa) fasta scores: E(): 2.6e-34, 25.43% id in 1270 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciS protein SWALL:Q93IR7 (EMBL:AJ320483) (1289 aa) fasta scores: E(): 4.5e-13, 25.89% id in 1259 aa.
 
   
 0.940
BPSL3096
Putative bacteriophage-related peptidase; Similar to Bacteriophage A500 L-alanyl-D-glutamate peptidase Ply or Ply500 SWALL:AEPE_BPA50 (SWALL:Q37979) (289 aa) fasta scores: E(): 0.001, 35.78% id in 109 aa, and to Listeria innocua phagelysin Cply2438 SWALL:Q48583 (EMBL:X89234) (287 aa) fasta scores: E(): 0.0019, 34.86% id in 109 aa.
 
   
 0.858
BPSL3109
Putative lipoprotein; Similar to Ralstonia solanacearum putative transmembrane protein Rsp0741 or Rs01967 SWALL:Q8XRU0 (EMBL:AL646080) (193 aa) fasta scores: E(): 3.9e-40, 59.16% id in 191 aa.
  
   
 0.746
BPSL3111
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein Rsp0739 or Rs01969 SWALL:Q8XRU2 (EMBL:AL646080) (263 aa) fasta scores: E(): 2.7e-70, 64.98% id in 257 aa.
 
   
 0.729
BPSL3104
Similar to Ralstonia solanacearum hypothetical protein Rsp0746 or Rs01962 SWALL:Q8XRT5 (EMBL:AL646080) (157 aa) fasta scores: E(): 1.4e-42, 71.79% id in 156 aa.
  
     0.712
BPSL3105
Similar to Ralstonia solanacearum hypothetical protein Rsp0745 or Rs01963 SWALL:Q8XRT6 (EMBL:AL646080) (167 aa) fasta scores: E(): 3.7e-49, 72.45% id in 167 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2367 SWALL:Q9I1B2 (EMBL:AE004663) (165 aa) fasta scores: E(): 1.1e-11, 32.91% id in 158 aa.
  
    0.712
BPSS0078
Conserved hypothetical protein; Similar to Ralstonia solanacearum putative VGR-related protein rsp0518 or rs06151 SWALL:Q8XSF8 (EMBL:AL646079) (908 aa) fasta scores: E(): 1.1e-90, 41.55% id in 900 aa, and to Escherichia coli VgrE protein SWALL:O52660 (EMBL:AF044499) (702 aa) fasta scores: E(): 0.00017, 25% id in 532 aa.
 
     0.676
BPSL3110
Similar to Ralstonia solanacearum hypothetical protein Rsp0740 or Rs01968 SWALL:Q8XRU1 (EMBL:AL646080) (448 aa) fasta scores: E(): 3.8e-135, 73.66% id in 448 aa, and to Rhizobium leguminosarum ImpJ SWALL:Q93EC4 (EMBL:AF361470) (446 aa) fasta scores: E(): 8.8e-32, 29.13% id in 460 aa.
  
     0.675
BPSS1213
Conserved hypothetical protein; Similar to Ralstonia solanacearum putative VGR-related protein rsc3222 or rs02439 SWALL:Q8XUG6 (EMBL:AL646074) (547 aa) fasta scores: E(): 7.4e-54, 45.28% id in 382 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0262 SWALL:Q9I6M7 (EMBL:AE004464) (1019 aa) fasta scores: E(): 4.1e-43, 31.13% id in 893 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1511 SWALL:Q9I3K1 (EMBL:AE004579) (842 aa) fasta scores: E(): 7.3e-39, 30.09% id in 864 aa.
 
     0.675
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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