STRINGSTRING
BPSL3336 BPSL3336 BPSL3335 BPSL3335 BPSL3334 BPSL3334 FliL FliL BPSL0024 BPSL0024 BPSS1742 BPSS1742
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL3336Putative lipoprotein; Similar to Ralstonia solanacearum probable lipoprotein Rsp0673 or Rs01776 SWALL:Q8XS08 (EMBL:AL646080) (227 aa) fasta scores: E(): 4.3e-52, 68.32% id in 221 aa. (225 aa)    
Predicted Functional Partners:
BPSL3335
Putative lipoprotein; Similar to Ralstonia solanacearum probable lipoprotein Rsp0674 or Rs01775 SWALL:Q8XS07 (EMBL:AL646080) (125 aa) fasta scores: E(): 4.4e-17, 52.94% id in 119 aa.
 
    0.969
BPSL3334
Putative lipoprotein; Similar to Ralstonia solanacearum probable lipoprotein Rsp0675 or Rs01774 SWALL:Q8XS06 (EMBL:AL646080) (223 aa) fasta scores: E(): 6.9e-51, 63.72% id in 215 aa.
 
    0.956
FliL
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.585
BPSL0024
LrgA family protein; Similar to Pseudomonas aeruginosa hypothetical protein PA3432 SWALL:Q9HYH3 (EMBL:AE004764) (129 aa) fasta scores: E(): 5e-16, 46.78% id in 109 aa, and to Vibrio cholerae hypothetical protein VC2101 SWALL:Q9KQ99 (EMBL:AE004284) (146 aa) fasta scores: E(): 9.1e-13, 41.32% id in 121 aa.
  
     0.483
BPSS1742
Similar to Pseudomonas putida outer membrane copper receptor OprC or pp4838 SWALL:AAN70407 (EMBL:AE016792) (688 aa) fasta scores: E(): 5.8e-81, 59.23% id in 655 aa, and to Pseudomonas stutzeri outer membrane protein NosA SWALL:Q8KLV2 (EMBL:AJ507426) (719 aa) fasta scores: E(): 9e-71, 49.48% id in 675 aa.
  
     0.436
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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