Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BPSL1365 | BPSL3363 | BPSL1365 | BPSL3363 | Putative phosphate regulon two-component system sensor kinase; Similar to Escherichia coli phosphate regulon sensor protein PhoR or NmpB or b0400 SWALL:PHOR_ECOLI (SWALL:P08400) (431 aa) fasta scores: E(): 1.5e-50, 36.83% id in 429 aa, and to Ralstonia solanacearum probable phosphate regulon two-component sensor kinase transcription regulator protein rsc1535 or rs03768 SWALL:Q8XZ69 (EMBL:AL646065) (443 aa) fasta scores: E(): 1.5e-104, 61.89% id in 433 aa. | Putative membrane protein; No significant database similarities. | 0.458 |
| BPSL3363 | BPSL1365 | BPSL3363 | BPSL1365 | Putative membrane protein; No significant database similarities. | Putative phosphate regulon two-component system sensor kinase; Similar to Escherichia coli phosphate regulon sensor protein PhoR or NmpB or b0400 SWALL:PHOR_ECOLI (SWALL:P08400) (431 aa) fasta scores: E(): 1.5e-50, 36.83% id in 429 aa, and to Ralstonia solanacearum probable phosphate regulon two-component sensor kinase transcription regulator protein rsc1535 or rs03768 SWALL:Q8XZ69 (EMBL:AL646065) (443 aa) fasta scores: E(): 1.5e-104, 61.89% id in 433 aa. | 0.458 |
| BPSL3363 | gcvP | BPSL3363 | BPSL3362 | Putative membrane protein; No significant database similarities. | Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.486 |
| BPSL3363 | sdaA | BPSL3363 | BPSL3364 | Putative membrane protein; No significant database similarities. | Similar to Escherichia coli L-serine dehydratase 1 SdaA or b1814 SWALL:SDHL_ECOLI (SWALL:P16095) (454 aa) fasta scores: E(): 1.7e-86, 52.7% id in 463 aa; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.688 |
| gcvP | BPSL3363 | BPSL3362 | BPSL3363 | Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Putative membrane protein; No significant database similarities. | 0.486 |
| gcvP | sdaA | BPSL3362 | BPSL3364 | Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Similar to Escherichia coli L-serine dehydratase 1 SdaA or b1814 SWALL:SDHL_ECOLI (SWALL:P16095) (454 aa) fasta scores: E(): 1.7e-86, 52.7% id in 463 aa; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.803 |
| sdaA | BPSL3363 | BPSL3364 | BPSL3363 | Similar to Escherichia coli L-serine dehydratase 1 SdaA or b1814 SWALL:SDHL_ECOLI (SWALL:P16095) (454 aa) fasta scores: E(): 1.7e-86, 52.7% id in 463 aa; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Putative membrane protein; No significant database similarities. | 0.688 |
| sdaA | gcvP | BPSL3364 | BPSL3362 | Similar to Escherichia coli L-serine dehydratase 1 SdaA or b1814 SWALL:SDHL_ECOLI (SWALL:P16095) (454 aa) fasta scores: E(): 1.7e-86, 52.7% id in 463 aa; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.803 |