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BPSS0108 BPSS0108 BPSL0618 BPSL0618 BPSS1834 BPSS1834 BPSS0109 BPSS0109 BPSS0110 BPSS0110 BPSS0111 BPSS0111 BPSS0112 BPSS0112 BPSS1835 BPSS1835 BPSS0113 BPSS0113 BPSS0114 BPSS0114 BPSS0115 BPSS0115
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
BPSS0108Putative Rhs-like protein (pseudogene); PS00017 ATP/GTP-binding site motif A (P-loop). (452 aa)    
Predicted Functional Partners:
BPSL0618
Putative sugar transferase; Similar to Escherichia coli putative colanic biosynthesis UDP-glucose lipid carrier transferase WcaJ SWALL:WCAJ_ECOLI (SWALL:P71241) (464 aa) fasta scores: E(): 9.8e-58, 37.08% id in 480 aa, and to Klebsiella pneumoniae probable capsular polysaccharide biosynthesis glycosyltransferase SWALL:YC14_KLEPN (SWALL:Q48460) (465 aa) fasta scores: E(): 8.3e-54, 35.71% id in 476 aa. Similar to BPSS1834, 50.433% identity (50.873% ungapped) in 462 aa overlap.
  
  
 0.687
BPSS1834
Putative lipopolysaccharide biosynthesis related protein; Similar to Escherichia coli putative colanic biosynthesis UDP-glucose lipid carrier transferase WcaJ or b2047 SWALL:WCAJ_ECOLI (SWALL:P71241) (464 aa) fasta scores: E(): 2.5e-59, 39.65% id in 469 aa, and to Salmonella typhimurium putative undecaprenylphosphate glucosephosphotransferase WcaJ or stm2103 SWALL:Q9F799 (EMBL:AF285085) (464 aa) fasta scores: E(): 2.8e-58, 38.92% id in 465 aa. Note: Also similar to BPSL0618 (473 aa) fasta scores: E(): 3.5e-96, 50.433% identity in 462 aa overlap.
  
  
 0.687
BPSS0109
Putative exported protein; Similar to Yersinia pestis putative fimbrial protein ypo2950 or y1533 SWALL:Q8ZCN1 (EMBL:AJ414154) (343 aa) fasta scores: E(): 0.00019, 23.52% id in 357 aa, and C-terminal region to Salmonella typhimurium fimbrial-like protein precursor FimF or stm0548 SWALL:FIMF_SALTY (SWALL:P37926) (172 aa) fasta scores: E(): 0.41, 27.38% id in 168 aa.
       0.673
BPSS0110
Conserved hypothetical protein; Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium putative cytoplasmic protein stm0266 or SciA SWALL:Q93IT5 (EMBL:AE008707) (351 aa) fasta scores: E(): 9.6e-42, 43.42% id in 350 aa, and to Yersinia pestis hypothetical protein ypo2949 SWALL:Q8ZCN2 (EMBL:AJ414154) (393 aa) fasta scores: E(): 1.1e-31, 38.03% id in 376 aa. Note: Also similar to BPSS0180 (382 aa) fasta scores: E(): 3.7e-28, 44.101% identity in 356 aa overlap.
 
     0.613
BPSS0111
Similar to Yersinia pestis hypothetical protein ypo2948 SWALL:Q8ZCN3 (EMBL:AJ414154) (341 aa) fasta scores: E(): 5.7e-72, 52.1% id in 332 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciB protein SWALL:Q93IT4 (EMBL:AJ320483) (291 aa) fasta scores: E(): 9.5e-68, 57.54% id in 285 aa. Note: Also similar to BPSS0179 (363 aa) fasta scores: E(): 2.8e-68, 55.224% identity in 335 aa overlap.
 
     0.566
BPSS0112
Similar to Yersinia pestis hypothetical protein ypo2947 or y1537 SWALL:Q8ZCN4 (EMBL:AJ414154) (626 aa) fasta scores: E(): 3.3e-177, 64.05% id in 626 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciC protein SWALL:Q93IT3 (EMBL:AJ320483) (627 aa) fasta scores: E(): 8.1e-163, 60.92% id in 627 aa. Note: Also similar to BPSS0178 (630 aa) fasta scores: E(): 1.5e-156, 63.796% identity in 627 aa overlap.
  
    0.515
BPSS1835
Putative LPS biosynthesis mannose-1-phosphate guanylyltransferase; Similar to Salmonella enterica subsp. enterica GDP-mannose pyrophosphorylase ManC SWALL:Q9EXX7 (EMBL:AY012192) (482 aa) fasta scores: E(): 4.4e-76, 48.45% id in 485 aa, and to Escherichia coli O157:H7 mannose-1-phosphate guanylyltransferase ManC or z3195 or ecs2836 SWALL:MANC_ECO57 (SWALL:O85342) (482 aa) fasta scores: E(): 1.2e-75, 48.14% id in 486 aa. Note: Also similar to BPSL0605 ManC (531 aa) fasta scores: E(): 1.2e-105, 63.843% identity in 484 aa overlap; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.505
BPSS0113
Conserved hypothetical protein; Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium putative cytoplasmic protein stm0269 or SciD SWALL:Q93IT2 (EMBL:AE008707) (164 aa) fasta scores: E(): 1.2e-21, 43.79% id in 153 aa, and to Yersinia pestis hypothetical protein ypo2728 or y1561 SWALL:Q8ZD64 (EMBL:AJ414153) (159 aa) fasta scores: E(): 3.1e-20, 40.12% id in 157 aa. Note: Also similar to BPSS0177 (194 aa) fasta scores: E(): 1.6e-24, 45.912% identity in 159 aa overlap.
       0.503
BPSS0114
Conserved hypothetical protein; Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciE protein SWALL:Q93IT1 (EMBL:AJ320483) (279 aa) fasta scores: E(): 5.9e-38, 39.85% id in 276 aa, and to Yersinia pestis hypothetical protein ypo2727 or y1560 SWALL:Q8ZD65 (EMBL:AJ414153) (268 aa) fasta scores: E(): 8.6e-36, 39.36% id in 254 aa. Note: Also similar to BPSS0176 (322 aa) fasta scores: E(): 4.8e-29, 39.590% identity in 293 aa overlap.
       0.503
BPSS0115
Hypothetical protein; No significant database matches.
       0.503
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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