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BPSS0182 BPSS0182 BPSS0184 BPSS0184 BPSS0185 BPSS0185 BPSS0183 BPSS0183 BPSS0528 BPSS0528 BPSS1507 BPSS1507 BPSS0181 BPSS0181 BPSS0526 BPSS0526 BPSS0178 BPSS0178 BPSS0179 BPSS0179 BPSS0180 BPSS0180
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS0182Conserved hypothetical protein; Similar in its full length to Yersinia pestis hypothetical y3665 SWALL:AAM87213 (EMBL:AE013969) (739 aa) fasta scores: E(): 6.7e-20, 24.39% id in 779 aa, C-terminal region to Yersinia pestis hypothetical protein ypo0509 SWALL:Q8ZII9 (EMBL:AJ414143) (540 aa) fasta scores: E(): 3.1e-09, 23.14% id in 566 aa, and N-terminal region to Rhizobium loti hypothetical protein mlr2351 SWALL:Q98IL3 (EMBL:AP002999) (367 aa) fasta scores: E(): 0.00016, 29.11% id in 261 aa. (825 aa)    
Predicted Functional Partners:
BPSS0184
Hypothetical protein; No significant database matches.
 
     0.892
BPSS0185
Similar to Yersinia pestis hypothetical protein ypo0511a or y3662 SWALL:Q8ZII6 (EMBL:AJ414143) (121 aa) fasta scores: E(): 2e-08, 40.17% id in 117 aa.
 
  
 0.872
BPSS0183
Conserved hypothetical protein; Similar to the C-terminal region of Anabaena sp. hypothetical protein all3114 SWALL:Q8YSH1 (EMBL:AP003591) (576 aa) fasta scores: E(): 3.3e-14, 26.19% id in 313 aa, and to the full length of Synechocystis sp. hypothetical protein sll1446 SWALL:P74206 (EMBL:D90913) (320 aa) fasta scores: E(): 6.2e-10, 24.76% id in 323 aa.
 
    
0.846
BPSS0528
Similar to Yersinia pestis hypothetical protein ypo0511a SWALL:Q8ZII6 (EMBL:AJ414143) (121 aa) fasta scores: E(): 1.1e-09, 44.14% id in 111 aa. Similar to BPSS0185, 55.556% identity (56.075% ungapped) in 108 aa overlap.
 
  
 0.803
BPSS1507
Hypothetical protein; Weakly similar to Yersinia pestis hypothetical protein ypo0511a or y3662 SWALL:Q8ZII6 (EMBL:AJ414143) (121 aa) fasta scores: E(): 0.57, 28.84% id in 104 aa.
 
  
 0.795
BPSS0181
Similar to Yersinia pestis hypothetical protein ypo2725 SWALL:Q8ZD67 (EMBL:AJ414153) (921 aa) fasta scores: E(): 4.7e-87, 45.51% id in 580 aa, and to Shigella flexneri Rhs-family protein sf0265 SWALL:AAN41925 (EMBL:AE015061) (737 aa) fasta scores: E(): 2.4e-74, 46.15% id in 546 aa.
 
    0.787
BPSS0526
Hypothetical protein; Weakly similar to Chlorobium tepidum pentapeptide repeat family protein CT0918 SWALL:AAM72153 (EMBL:AE012857) (382 aa) fasta scores: E(): 0.06, 19.69% id in 325 aa.
 
     0.777
BPSS0178
Conserved hypothetical protein; Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciC protein SWALL:Q93IT3 (EMBL:AJ320483) (627 aa) fasta scores: E(): 3.9e-156, 61.14% id in 628 aa, and to Yersinia pestis hypothetical protein ypo2947 or y1537 SWALL:Q8ZCN4 (EMBL:AJ414154) (626 aa) fasta scores: E(): 2.1e-143, 55.09% id in 628 aa. Note: Also similar to BPSS0112 (627 aa) fasta scores: E(): 1.2e-144, 63.796% identity in 627 aa overlap.
 
    0.622
BPSS0179
Conserved hypothetical protein; Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciB protein SWALL:Q93IT4 (EMBL:AJ320483) (291 aa) fasta scores: E(): 1.2e-65, 56.29% id in 286 aa, and to Yersinia pestis hypothetical protein ypo2948 SWALL:Q8ZCN3 (EMBL:AJ414154) (341 aa) fasta scores: E(): 1.2e-57, 47.02% id in 319 aa. Note: This CDS is longer in its N-terminal region than most of its database matches and it is also similar to BPSS0111 (350 aa) fasta scores: E(): 4.6e-66, 55.224% identity in 335 aa overlap.
  
    0.612
BPSS0180
Conserved hypothetical protein; Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium putative cytoplasmic protein stm0266 or SciA SWALL:Q93IT5 (EMBL:AE008707) (351 aa) fasta scores: E(): 1.7e-34, 45.33% id in 364 aa, and to Yersinia pestis hypothetical protein ypo2949 SWALL:Q8ZCN2 (EMBL:AJ414154) (393 aa) fasta scores: E(): 5.7e-20, 30.53% id in 393 aa. Note: Also similar to BPSS0110 (357 aa) fasta scores: E(): 1.3e-23, 44.101% identity in 356 aa overlap.
  
    0.604
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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