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BPSS0307 BPSS0307 speB-2 speB-2 BPSL2335 BPSL2335 BPSS0468 BPSS0468 putA putA glt1 glt1 gabT gabT BPSL2925 BPSL2925 glt2 glt2 glsA glsA glnA glnA
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BPSS0307Similar to Bacillus subtilis betaine aldehyde dehydrogenase GbsA SWALL:DHAB_BACSU (SWALL:P71016) (490 aa) fasta scores: E(): 6.9e-59, 40.08% id in 474 aa, and to Salmonella typhi putative aldehyde dehydrogenase sty1467 SWALL:Q8Z747 (EMBL:AL627270) (481 aa) fasta scores: E(): 1.2e-101, 59.02% id in 471 aa. (470 aa)    
Predicted Functional Partners:
speB-2
Agmatinase; Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri agmatinase SpeB or b2937 or z4281 or ecs3812 or sf2927 SWALL:SPEB_ECOLI (SWALL:P16936) (306 aa) fasta scores: E(): 1.3e-23, 42.17% id in 294 aa, and to Pseudomonas aeruginosa agmatinase SpeB2 or pa1421 SWALL:Q9I3S3 (EMBL:AE004571) (319 aa) fasta scores: E(): 1.3e-89, 71.47% id in 319 aa; Belongs to the arginase family.
  
 0.913
BPSL2335
Aminotransferase class-III; Similar to Pseudomonas aeruginosa probable aminotransferase pa0299 SWALL:Q9I6J2 (EMBL:AE004467) (456 aa) fasta scores: E(): 3.5e-110, 57.78% id in 443 aa, and to Pseudomonas fluorescens component of putrescine transport system BioA SWALL:Q9AH00 (EMBL:AF323694) (453 aa) fasta scores: E(): 1.3e-109, 58.07% id in 446 aa. CDS is extended at the N-terminus in comparison to orthologues. Similar to BPSS0468, 96.218% identity (97.240% ungapped) in 476 aa overlap; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.900
BPSS0468
Putative aminotransferase; Similar to Pseudomonas fluorescens BioA SWALL:Q9AH00 (EMBL:AF323694) (453 aa) fasta scores: E(): 1.1e-109, 58.29% id in 446 aa, and to Agrobacterium tumefaciens adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA or atu1002 or agr_c_1843 SWALL:Q8UGN4 (EMBL:AE009065) (484 aa) fasta scores: E(): 3.3e-101, 54.56% id in 438 aa; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
  0.900
putA
Bifunctional PutA protein [includes: proline dehydrogenase (EC 1.5.99.8) (proline oxidase); Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
0.866
glt1
Glutamate synthase large subunit; Similar to Synechocystis sp. ferredoxin-dependent glutamate synthase 2 GltS or Sll1499 SWALL:GLTS_SYNY3 (SWALL:P55038) (1556 aa) fasta scores: E(): 0, 43.8% id in 1573 aa, and to Ralstonia solanacearum probable glutamate synthase GltB or Rsc2965 or Rs01332 SWALL:Q8XV66 (EMBL:AL646072) (1582 aa) fasta scores: E(): 0, 83.76% id in 1564 aa.
  
 
 0.860
gabT
Similar to Escherichia coli 4-aminobutyrate aminotransferase GabT or b2662 SWALL:GABT_ECOLI (SWALL:P22256) (426 aa) fasta scores: E(): 4.8e-79, 54.24% id in 424 aa, and to Ralstonia solanacearum probable 4-aminobutyrate aminotransferase protein rsc0029 or rs01852 SWALL:Q8Y3F1 (EMBL:AL646057) (426 aa) fasta scores: E(): 1.5e-108, 71.29% id in 418 aa; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.834
BPSL2925
Putative glutamate dehydrogenase; Similar to Bacillus subtilis NAD-specific glutamate dehydrogenase GudB SWALL:GUDB_BACSU (SWALL:P50735) (426 aa) fasta scores: E(): 2.1e-70, 47.51% id in 402 aa, and to Salmonella typhimurium putative homolog of glutamic dehyrogenase stm1795 SWALL:Q8ZP21 (EMBL:AE008780) (441 aa) fasta scores: E(): 2.4e-109, 64.67% id in 419 aa; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.823
glt2
Similar to Ralstonia solanacearum probable glutamate synthase GltD or Rsc2964 or Rs01333 SWALL:Q8XV67 (EMBL:AL646072) (487 aa) fasta scores: E(): 2.8e-142, 77.66% id in 488 aa, and to Oryza sativa NADH dependent glutamate synthase precursor SWALL:Q9ZNX7 (EMBL:AB008845) (2166 aa) fasta scores: E(): 6.9e-74, 51.6% id in 500 aa.
    
 0.811
glsA
Similar to Rhizobium etli thermolabile glutaminase GlsA SWALL:GLSA_RHIET (SWALL:O87405) (309 aa) fasta scores: E(): 4e-60, 53.44% id in 305 aa, and to Ralstonia solanacearum probable glutaminase A protein rsp1143 or rs05469 SWALL:Q8XQS6 (EMBL:AL646083) (304 aa) fasta scores: E(): 9.9e-96, 78.28% id in 304 aa.
    
 0.810
glnA
Similar to Escherichia coli glutamine synthetase GlnA SWALL:GLNA_ECOLI (SWALL:P06711) (468 aa) fasta scores: E(): 3.4e-133, 65.51% id in 464 aa, and to Ralstonia solanacearum probable glutamine synthetase protein rsc1258 or rs02774 SWALL:Q8XZY7 (EMBL:AL646063) (471 aa) fasta scores: E(): 2e-175, 85.77% id in 471 aa.
  
 
 0.805
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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