STRINGSTRING
BPSS0564 BPSS0564 BPSS1911 BPSS1911 BPSS0563 BPSS0563 BPSL2047 BPSL2047 BPSL1135 BPSL1135 BPSL2901 BPSL2901 BPSS1282 BPSS1282 BPSS2053 BPSS2053 BPSS1977 BPSS1977 BPSS0717 BPSS0717 BPSS0910 BPSS0910
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
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Cooccurrence
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Experiments
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[Homology]
Score
BPSS0564Putative thermolysin metallopeptidase; Similar to Bacillus stearothermophilus thermolysin precursor NprT SWALL:THER_BACST (SWALL:P06874) (548 aa) fasta scores: E(): 0.00076, 23.78% id in 597 aa, and to Alicyclobacillus acidocaldarius thermolysin precursor SWALL:Q43880 (EMBL:U07824) (546 aa) fasta scores: E(): 2.5e-05, 24.32% id in 592 aa. (567 aa)    
Predicted Functional Partners:
BPSS1911
Putative membrane protein; No significant database matches.
  
     0.766
BPSS0563
Aminopeptidase; Similar to the N-terminal region of Vibrio proteolyticus bacterial leucyl aminopeptidase precursor SWALL:AMPX_VIBPR (SWALL:Q01693) (504 aa) fasta scores: E(): 1.8e-62, 45.27% id in 402 aa, and to the full length Aeromonas punctata aminopeptidase ApaC SWALL:O82996 (EMBL:AB015725) (393 aa) fasta scores: E(): 2.6e-61, 46.63% id in 401 aa.
 
  
 0.760
BPSL2047
Conserved hypothetical protein; Similar to the N-terminal region of Ralstonia solanacearum hypothetical protein rsp0177 or rs04689 SWALL:Q8XTD6 (EMBL:AL646077) (740 aa) fasta scores: E(): 8.9e-16, 38.02% id in 760 aa.
  
     0.752
BPSL1135
Hypothetical protein; No significant database matches.
  
     0.749
BPSL2901
Putative lipoprotein; Very low similarity to Pseudomonas aeruginosa hypothetical protein pa4384 SWALL:Q9HW18 (EMBL:AE004854) (228 aa) fasta scores: E(): 3.6e-05, 31.84% id in 157 aa.
  
     0.747
BPSS1282
Putative lipoprotein; No significant database matches.
  
     0.737
BPSS2053
Putative cell surface protein; Similar to Ralstonia solanacearum probable hemagglutinin-related protein Rsc1775 or Rs04371 SWALL:Q8XYI3 (EMBL:AL646066) (3165 aa) fasta scores: E(): 3.8e-164, 33.54% id in 3258 aa, and to Yersinia pestis putative adhesin Ypo0599 or y3579 SWALL:Q8ZIA8 (EMBL:AJ414143) (3295 aa) fasta scores: E(): 3.1e-62, 30.38% id in 3383 aa.
  
  
 0.735
BPSS1977
Putative exported protein; Low similarity to Pseudomonas aeruginosa probable glycosyl hydrolase pa2237 SWALL:Q9I1N2 (EMBL:AE004649) (442 aa) fasta scores: E(): 9.6e-15, 25.65% id in 382 aa.
  
     0.721
BPSS0717
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc0982 or rs04310 SWALL:Q8Y0R1 (EMBL:AL646062) (429 aa) fasta scores: E(): 1.4e-83, 53.42% id in 423 aa, and to Rhizobium meliloti putative two-component sensor histidine kinase protein rb1162 or smb20868 SWALL:Q92UG9 (EMBL:AL603646) (1229 aa) fasta scores: E(): 1e-09, 26.43% id in 435 aa.
  
     0.717
BPSS0910
Conserved hypothetical protein; Similar to Salmonella typhimurium, and Salmonella typhi protein nucleotide-binding protein stm0614 or sty0662 SWALL:Q8XGB9 (EMBL:AE008724) (142 aa) fasta scores: E(): 0.19, 28.16% id in 142 aa, and to Methanobacterium thermoautotrophicum conserved protein mth898 SWALL:O26984 (EMBL:AE000865) (149 aa) fasta scores: E(): 0.26, 29.16% id in 144 aa.
  
     0.707
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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