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BPSS0580 BPSS0580 BPSS0666 BPSS0666 BPSS1555 BPSS1555 BPSS0827 BPSS0827 bcsB bcsB bsaV bsaV BPSS0563 BPSS0563 BPSS1351 BPSS1351 BPSS0537 BPSS0537 BPSS0682 BPSS0682 BPSL0473 BPSL0473
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BPSS0580Subfamily M23A unassigned peptidase; N-terinal region is similar to the C-terminal region of Pseudomonas aeruginosa protease LasA SWALL:LASA_PSEAE (SWALL:P14789) (418 aa) fasta scores: E(): 6.2e-10, 29.22% id in 308 aa, and to Achromobacter lyticus beta-lytic metalloendopeptidase precursor SWALL:PRLB_ACHLY (SWALL:P27458) (374 aa) fasta scores: E(): 1.2e-08, 28.85% id in 305 aa. (411 aa)    
Predicted Functional Partners:
BPSS0666
Putative collagenase; Subfamily M9A unassigned peptidase. C-terminal region is similar to an internal region of Vibrio alginolyticus microbial collagenase precursor SWALL:COLA_VIBAL (SWALL:P43154) (814 aa) fasta scores: E(): 1.8e-54, 32.52% id in 578 aa, and to the C-terminal region of Vibrio parahaemolyticus microbial collagenase precursor PrtVp SWALL:COLA_VIBPA (SWALL:Q56696) (587 aa) fasta scores: E(): 9.3e-48, 33.21% id in 545 aa. Similar to BPSS0827, 81.329% identity (81.458% ungapped) in 632 aa overlap.
  
  
 0.786
BPSS1555
Family M4 unassigned peptidase; Extracellular zinc metalloprotease.
 
  
 0.709
BPSS0827
Subfamily M9A unassigned peptidase; C-terminus is similar to the C-terminal region of Vibrio parahaemolyticus microbial collagenase precursor PrtVp SWALL:COLA_VIBPA (SWALL:Q56696) (587 aa) fasta scores: E(): 3.4e-43, 31.36% id in 542 aa. Similar to the N-terminal region of Streptomyces coelicolor SC10A5.17 protein SCO5912 or SC10A5.17 SWALL:O54108 (EMBL:AL939125) (865 aa) fasta scores: E(): 2.8e-63, 35.88% id in 627 aa. Similar to BPSS0666, 81.329% identity (81.458% ungapped) in 632 aa overlap.
  
    0.615
bcsB
Cyclic di-GMP binding protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
      
 0.579
bsaV
Surface presentation of antigens protein; Similar to Salmonella typhimurium SpaO SWALL:Q57524 (EMBL:U29358) (303 aa) fasta scores: E(): 0.045, 28.34% id in 314 aa.
  
   0.525
BPSS0563
Aminopeptidase; Similar to the N-terminal region of Vibrio proteolyticus bacterial leucyl aminopeptidase precursor SWALL:AMPX_VIBPR (SWALL:Q01693) (504 aa) fasta scores: E(): 1.8e-62, 45.27% id in 402 aa, and to the full length Aeromonas punctata aminopeptidase ApaC SWALL:O82996 (EMBL:AB015725) (393 aa) fasta scores: E(): 2.6e-61, 46.63% id in 401 aa.
  
  
 0.478
BPSS1351
Putative rhamnosyltransferase protein; Similar to Pseudomonas aeruginosa rhamnosyltransferase chain B RhlB or pa3478 SWALL:Q9HYD1 (EMBL:AE004768) (426 aa) fasta scores: E(): 6.3e-48, 48% id in 427 aa, and to Candida albicans UDP-glucose:sterol glucosyltransferase ugt51c1 SWALL:Q9Y752 (EMBL:AF091398) (1516 aa) fasta scores: E(): 9.5e-09, 25.31% id in 403 aa.
  
    0.458
BPSS0537
Putative UDP-glucoronosyl and UDP-glucosyl transferase; Similar to Pseudomonas aeruginosa rhamnosyltransferase 1 catalytic subunit B RhlB SWALL:Q51560 (EMBL:L28170) (426 aa) fasta scores: E(): 1.2e-47, 47.54% id in 427 aa, and to Nocardia aerocolonigenes putative glycosyltransferase RbmA or Ngt SWALL:CAC93713 (EMBL:AF534707) (421 aa) fasta scores: E(): 3.7e-08, 27.35% id in 446 aa. Almost identical to BPSS1351, 99.569% identity (99.569% ungapped) in 464 aa overlap.
  
    0.456
BPSS0682
Similar to Vibrio vulnificus conserved hypothetical protein vv12197 SWALL:AAO10581 (EMBL:AE016804) (129 aa) fasta scores: E(): 5.3e-16, 46.15% id in 117 aa, and to Streptomyces coelicolor hypothetical protein SCO4364 or SCD19.19 SWALL:Q9F2Y3 (EMBL:AL939119) (125 aa) fasta scores: E(): 1.5e-09, 38.33% id in 120 aa. Possible alternative translational start sites.
  
     0.450
BPSL0473
Similar to Pseudomonas aeruginosa hypothetical protein pa5220 SWALL:Q9HTX0 (EMBL:AE004935) (273 aa) fasta scores: E(): 8.4e-70, 65.68% id in 271 aa.
   
    0.416
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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