Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BPSS0767 | BPSS0768 | Hypothetical protein; No significant database matches. | Conserved hypothetical protein (fragment); Possible gene remnant. Similar to the C-terminal regions of Bradyrhizobium japonicum USDA 110 BLL6723 protein SWALL:Q89FH7 (EMBL:AP005959) (568 aa) fasta scores: E(): 2.1e-10, 52.27% id in 88 aa, and Francisella novicida acid phosphatase precursor acpA SWALL:Q47936 (EMBL:L39831) (514 aa) fasta scores: E(): 0.093, 38.59% id in 57 aa. | 0.421 |
BPSS0768 | BPSS0767 | Conserved hypothetical protein (fragment); Possible gene remnant. Similar to the C-terminal regions of Bradyrhizobium japonicum USDA 110 BLL6723 protein SWALL:Q89FH7 (EMBL:AP005959) (568 aa) fasta scores: E(): 2.1e-10, 52.27% id in 88 aa, and Francisella novicida acid phosphatase precursor acpA SWALL:Q47936 (EMBL:L39831) (514 aa) fasta scores: E(): 0.093, 38.59% id in 57 aa. | Hypothetical protein; No significant database matches. | 0.421 |