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BPSS0802 BPSS0802 BPSL0048 BPSL0048 braC braC BPSL3412 BPSL3412 BPSL2404 BPSL2404 BPSL3388 BPSL3388 BPSL0050 BPSL0050 BPSL1205 BPSL1205 BPSL3284 BPSL3284 BPSL3416 BPSL3416 BPSL0921 BPSL0921
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BPSS0802Putative extracellular ligand binding protein; Similar to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 8.7e-34, 33.6% id in 369 aa, and to Ralstonia solanacearum putative amino-acid transport signal peptide protein rsc3300 or rs02529 SWALL:Q8XU93 (EMBL:AL646074) (377 aa) fasta scores: E(): 1.6e-60, 49.31% id in 367 aa. Similar to BPSL3284, 88.421% identity (88.421% ungapped) in 380 aa overlap. (380 aa)    
Predicted Functional Partners:
BPSL0048
Putative membrane protein; Similar to Aeropyrum pernix hypothetical high-affinity branched-chain amino acid transport permease protein APE1304 SWALL:Q9YCF3 (EMBL:AP000061) (349 aa) fasta scores: E(): 1.8e-10, 26.99% id in 326 aa. C-terminal region is similar to the N-terminal region of Brucella melitensis high-affinity branched-chain amino acid transport system permease protein LivM / high-affinity branched-chain amino acid transport ATP-binding protein LivG bmeii0120 SWALL:Q8YDQ5 (EMBL:AE009650) (515 aa) fasta scores: E(): 2.8e-13, 34.29% id in 277 aa.
 
  
 0.927
braC
Similar to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 5.9e-79, 59.23% id in 368 aa, and to Escherichia coli Leu/Ile/Val-binding protein precursor LivJ b3460 SWALL:LIVJ_ECOLI (SWALL:P02917) (367 aa) fasta scores: E(): 2.3e-65, 50.41% id in 361 aa.
  
  
 
0.917
BPSL3412
Similar to predicted amino-acid-binding periplasmic proteins eg. Ralstonia solanacearum probable amino-acid-binding periplasmic Rsc3329 or Rs02563 SWALL:Q8XU64 (EMBL:AL646074) (382 aa) fasta scores: E(): 3.5e-93, 67.62% id in 383 aa.
  
  
 
0.911
BPSL2404
Periplasmic ligand binding lipoprotein; Similar to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 6.5e-30, 34.59% id in 370 aa, and to Ralstonia solanacearum putative amino-acid transport signal peptide protein rsc3300 or rs02529 SWALL:Q8XU93 (EMBL:AL646074) (377 aa) fasta scores: E(): 1.6e-58, 48.41% id in 378 aa.
  
  
 
0.910
BPSL3388
Similar to Ralstonia solanacearum putative amino-acid transport signal peptide protein Rsc3300 or Rs02529 SWALL:Q8XU93 (EMBL:AL646074) (377 aa) fasta scores: E(): 2.9e-92, 71.11% id in 367 aa, and to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC or Pa1074 SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 3.2e-32, 34.85% id in 373 aa.
  
  
 
0.905
BPSL0050
Hypothetical protein; N-terminus is weakly similar to N-terminal regions of Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 0.0088, 22.61% id in 367 aa, and to Ralstonia solanacearum probable leu/ile/val-binding signal peptide protein rsc2864 or rs00241 SWALL:Q8XVG7 (EMBL:AL646072) (385 aa) fasta scores: E(): 2.9e-05, 25% id in 360 aa. CDS is a possible lipoprotein, but has a poor N-terminal signal sequence.
     
  0.900
BPSL1205
Putative amino acid transport system, exported protein; Similar to Ralstonia solanacearum probable transporter signal peptide protein rsc2070 or rs03635 SWALL:Q8XXP3 (EMBL:AL646068) (418 aa) fasta scores: E(): 4.2e-94, 62.2% id in 418 aa, and to Brucella melitensis leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor bmeii0069 SWALL:Q8YDV5 (EMBL:AE009645) (228 aa) fasta scores: E(): 6.7e-14, 30.97% id in 226 aa.
     
  0.900
BPSL3284
Putative secreted substrate binding protein; Similar to Ralstonia solanacearum putative amino acid-binding periplasmic ABC transporter protein Rsc2441 or Rs01353 SWALL:Q8XWN2 (EMBL:AL646070) (336 aa) fasta scores: E(): 7.2e-88, 74.1% id in 336 aa, and to Escherichia coli leucine-specific binding protein precursor LivK or b3458 SWALL:LIVK_ECOLI (SWALL:P04816) (369 aa) fasta scores: E(): 5.4e-31, 34.77% id in 348 aa.
  
  
 
0.900
BPSL3416
Putative branched-chain amino acid ABC transporter periplasmic substrate binding protein; Similar to Ralstonia solanacearum putative substrate-binding periplasmic rsc3342 or rs02578 SWALL:Q8XU51 (EMBL:AL646074) (402 aa) fasta scores: E(): 8.7e-112, 72.56% id in 401 aa, and to Azoarcus evansii putative substrate binding protein SWALL:Q93FB9 (EMBL:AF320253) (391 aa) fasta scores: E(): 1.8e-19, 28.69% id in 359 aa.
     
  0.900
BPSL0921
Putative transport system permease protein; Similar to the C-terminal region of Pseudomonas aeruginosa high-affinity branched-chain amino acid transport system permease protein BraE or pa1072 SWALL:BRAE_PSEAE (SWALL:P21628) (417 aa) fasta scores: E(): 3.3e-41, 44.56% id in 359 aa. Full length CDS is similar to and to Ralstonia solanacearum probable amino-acid transmembrane ABC transporter protein rsc2439 or rs02663 SWALL:Q8XWN4 (EMBL:AL646070) (378 aa) fasta scores: E(): 1.2e-100, 68.08% id in 376 aa.
 
  
 0.885
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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