STRINGSTRING
BPSS0879 BPSS0879 BPSL0119 BPSL0119 BPSL1490 BPSL1490 BPSL0126 BPSL0126 BPSL1204 BPSL1204 BPSL1933 BPSL1933 BPSL2513 BPSL2513 BPSL2165 BPSL2165 BPSL0536 BPSL0536 BPSL2257 BPSL2257 BPSL3017 BPSL3017
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS0879Putative porin protein; Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1e-14, 31.85% id in 405 aa, and to Burkholderia cepacia major porin protein OpcP1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 3.5e-69, 76.45% id in 378 aa. (374 aa)    
Predicted Functional Partners:
BPSL0119
Putative thioredoxin; Similar to Emericella nidulans thioredoxin SWALL:THIO_EMENI (SWALL:P29429) (109 aa) fasta scores: E(): 0.0055, 31.25% id in 80 aa, and to Ralstonia solanacearum putative thioredoxin-like protein rsc0067 or rs02246 SWALL:Q8Y3B3 (EMBL:AL646057) (129 aa) fasta scores: E(): 2.2e-24, 57.72% id in 123 aa.
  
 
   0.752
BPSL1490
Putative membrane protein; Similar to Ralstonia solanacearum probable inner membrane transmembrane protein rsc1181 or rs05713 SWALL:Q8Y063 (EMBL:AL646063) (598 aa) fasta scores: E(): 5e-135, 52.92% id in 582 aa, and to Neisseria meningitidis putative inner membrane protein nma0497 SWALL:Q9JW86 (EMBL:AL162753) (558 aa) fasta scores: E(): 2.1e-23, 26.95% id in 575 aa.
  
     0.744
BPSL0126
Putative exported protein; Similar to Neisseria meningitidis hypothetical protein nma0161 SWALL:Q9JWZ1 (EMBL:AL162752) (199 aa) fasta scores: E(): 1.2e-17, 36.87% id in 179 aa, and to the N-terminal region of Ralstonia solanacearum probable proline rich signal peptide protein rsc0076 or rs02253 SWALL:Q8Y3A4 (EMBL:AL646057) (256 aa) fasta scores: E(): 3.4e-38, 56.14% id in 171 aa.
  
     0.739
BPSL1204
Putative lipoprotein; Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc1480 or rs03826 SWALL:Q8XZC1 (EMBL:AL646064) (177 aa) fasta scores: E(): 7.6e-32, 54.32% id in 162 aa, and to Ralstonia solanacearum probable transmembrane protein rsc2071 or rs03636 SWALL:Q8XXP2 (EMBL:AL646068) (173 aa) fasta scores: E(): 6.8e-26, 48.07% id in 156 aa.
  
     0.728
BPSL1933
Putative exported protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc1146 or rs04607 SWALL:Q8Y098 (EMBL:AL646062) (398 aa) fasta scores: E(): 1e-27, 38.98% id in 395 aa, and to Neisseria meningitidis hypothetical protein nmb0928 SWALL:Q9JZR5 (EMBL:AE002444) (398 aa) fasta scores: E(): 9.5e-23, 30.93% id in 417 aa.
  
     0.720
BPSL2513
Putative membrane protein; No significant database matches.
  
     0.714
BPSL2165
Putative membrane protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.705
BPSL0536
Putative exported protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc0411 or rs03379 SWALL:Q8Y2C5 (EMBL:AL646059) (210 aa) fasta scores: E(): 2.7e-28, 49.18% id in 183 aa, and to Pseudomonas aeruginosa hypothetical protein pa4459 SWALL:Q9HVV8 (EMBL:AE004860) (190 aa) fasta scores: E(): 8.8e-07, 27.89% id in 190 aa.
  
     0.692
BPSL2257
Similar to Escherichia coli lipoprotein-34 precursor NlpB or DapX SWALL:NLPB_ECOLI (SWALL:P21167) (344 aa) fasta scores: E(): 0.11, 23.29% id in 395 aa, and to Ralstonia solanacearum probable transmembrane protein rsc1146 or rs04607 SWALL:Q8Y098 (EMBL:AL646062) (398 aa) fasta scores: E(): 4.9e-35, 42.21% id in 398 aa.
  
     0.691
BPSL3017
Similar to Ralstonia solanacearum hypothetical protein Rsc2836 or Rs00269 SWALL:Q8XVJ4 (EMBL:AL646072) (195 aa) fasta scores: E(): 1.2e-10, 38.6% id in 158 aa.
  
     0.688
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.