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BPSS1097 BPSS1097 BPSL0716 BPSL0716 BPSL0717 BPSL0717 BPSL0718 BPSL0718 pncB pncB BPSL0591 BPSL0591 BPSL3254 BPSL3254 BPSL1406 BPSL1406 BPSS0452 BPSS0452
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS1097Similar to Bacillus anthracis capsule biosynthesis protein CapA or pxo2-56 SWALL:CAPA_BACAN (SWALL:P19579) (411 aa) fasta scores: E(): 2.5e-08, 24.07% id in 324 aa, and to horizontally acquired Meloidogyne artiellia polyglutamate synthase ths SWALL:Q8T376 (EMBL:AJ310212) (361 aa) fasta scores: E(): 1.4e-79, 56.51% id in 361 aa, and to Mycobacterium tuberculosis hypothetical 41.5 kDa protein rv0574c or mtv039.12c or mt0602 SWALL:O53771 (EMBL:AL021942) (380 aa) fasta scores: E(): 1.4e-65, 50.98% id in 355 aa. Possible alternative translational start. (377 aa)    
Predicted Functional Partners:
BPSL0716
Hypothetical protein (pseudogene); Possible gene remnant. Similar to the C-terminal region of Mycobacterium tuberculosis hypothetical protein RV2030c rv2030c or mtv018.17c or mt2089 SWALL:O53475 (EMBL:AL021899) (681 aa) fasta scores: E(): 3.9e-62, 44.94% id in 465 aa, and to the full length Neurospora crassa conserved hypothetical protein 13E11.380 SWALL:Q9P6X8 (EMBL:AL353820) (474 aa) fasta scores: E(): 2.4e-33, 36.42% id in 464 aa. Contains a frameshift after codon 304. Frameshift possibly occurs at a polymeric repeat (GCG x4).
 
    0.774
BPSL0717
Conserved hypothetical protein; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
 
    0.706
BPSL0718
Putative phosphoribosyl transferase protein; Similar to Anabaena sp. hypothetical protein All1995 all1995 SWALL:Q8YVI3 (EMBL:AP003587) (221 aa) fasta scores: E(): 5.2e-36, 52.8% id in 214 aa, and to Methanosarcina mazei hypothetical protein Mm1780 mm1780 SWALL:AAM31476 (EMBL:AE013414) (221 aa) fasta scores: E(): 2.3e-35, 50.47% id in 212 aa, and to Mycobacterium tuberculosis DNA sequence SWALL:Q50819 (EMBL:M93129) (385 aa) fasta scores: E(): 4e-34, 48.14% id in 243 aa.
 
    0.682
pncB
Putative nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
  
    0.609
BPSL0591
Hypothetical protein; Internal region is similar to the C-terminal region of Photorhabdus luminescens insecticidal toxin complex protein TccB SWALL:O85156 (EMBL:AF047028) (1565 aa) fasta scores: E(): 0.028, 22.05% id in 544 aa. Contains coiled-coiled domains, residues 520 to 549 and 640 to 666.
  
     0.550
BPSL3254
Conserved hypothetical protein; Similar to many eg. Mycobacterium tuberculosis hypothetical protein Rv0579 or Mt0608.1 or mtv039.17 SWALL:O53776 (EMBL:AL021942) (252 aa) fasta scores: E(): 2.8e-35, 45.3% id in 245 aa.
 
     0.519
BPSL1406
Hypothetical protein; No significant database matches.
 
     0.510
BPSS0452
Putative phosphoesterase; Similar in its N-terminal region to Thermoanaerobacter tengcongensis DNA polymerase IV Pol4 or tte2516 SWALL:Q8R7A2 (EMBL:AE013193) (570 aa) fasta scores: E(): 3.1e-74, 43.36% id in 565 aa, and to Bacillus halodurans DNA-dependent DNA polymerase beta chain bh3107 SWALL:Q9K899 (EMBL:AP001517) (571 aa) fasta scores: E(): 5.3e-63, 38.21% id in 581 aa. Note: This CDS presents no similarity to any of the database matches in its C-terminal region (from approx. residue 577 onwards).
 
     0.489
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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