STRINGSTRING
BPSS1249 BPSS1249 BPSL0924 BPSL0924 BPSS1579 BPSS1579 BPSL1563 BPSL1563 BPSS0459 BPSS0459 lipB-2 lipB-2 BPSS1973 BPSS1973 BPSL1397 BPSL1397 BPSS1580 BPSS1580 BPSS2053 BPSS2053 BPSS0543 BPSS0543
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS1249Putative lipoprotein; No significant database matches. (730 aa)    
Predicted Functional Partners:
BPSL0924
Hypothetical protein; Poor database matches. Weakly similar to Ralstonia solanacearum hypothetical protein rsc1547 or rs05234 SWALL:Q8XZ57 (EMBL:AL646065) (242 aa) fasta scores: E(): 0.71, 25.4% id in 248 aa.
  
     0.768
BPSS1579
Hypothetical protein; No significant database matches to the full length protein.
  
     0.758
BPSL1563
Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein pa2784 SWALL:Q9I059 (EMBL:AE004706) (185 aa) fasta scores: E(): 3e-30, 51.06% id in 188 aa.
  
     0.757
BPSS0459
Similar to Ralstonia solanacearum probable copper resistance D transmembrane protein CopD or rsp0659 or rs01790 SWALL:Q8XS22 (EMBL:AL646080) (309 aa) fasta scores: E(): 2.3e-08, 30.88% id in 327 aa, and to Pseudomonas syringae copper resistance protein D copD SWALL:COPD_PSESF (SWALL:Q9KWM8) (311 aa) fasta scores: E(): 2.6e-08, 31.29% id in 262 aa.
  
     0.752
lipB-2
Lipase chaperone; May be involved in the folding of the extracellular lipase during its passage through the periplasm; Belongs to the lipase chaperone family.
  
     0.718
BPSS1973
sedolisin-B; Similar to Xanthomonas sp. xanthomonapepsin precursor SWALL:XANP_XANS2 (SWALL:Q60106) (827 aa) fasta scores: E(): 7.7e-91, 56.77% id in 627 aa, and to Pseudomonas sp. pseudomonapepsin precursor Pcp SWALL:PICP_PSESR (SWALL:P42790) (587 aa) fasta scores: E(): 2e-24, 48.81% id in 631 aa.
  
     0.697
BPSL1397
Similar to Ralstonia solanacearum putative porin signal peptide protein rsc2760 or rs00094 SWALL:Q8XVR9 (EMBL:AL646071) (353 aa) fasta scores: E(): 2e-21, 31.74% id in 356 aa, and to Neisseria gonorrhoeae major outer membrane protein P.IA precursor PorA SWALL:OMA_NEIGO (SWALL:P05430) (326 aa) fasta scores: E(): 4.8e-08, 27.58% id in 319 aa.
  
     0.689
BPSS1580
Similar to Acetobacter xylinus cellulose synthase 2 operon protein C precursor BcsciI SWALL:Q9WX71 (EMBL:AB015803) (1307 aa) fasta scores: E(): 3.8e-38, 28.41% id in 1327 aa, and to Acetobacter xylinus cellulose synthase operon protein c precursor acsC SWALL:ACSC_ACEXY (SWALL:P37718) (1319 aa) fasta scores: E(): 1.5e-08, 27.26% id in 1346 aa.
  
     0.673
BPSS2053
Putative cell surface protein; Similar to Ralstonia solanacearum probable hemagglutinin-related protein Rsc1775 or Rs04371 SWALL:Q8XYI3 (EMBL:AL646066) (3165 aa) fasta scores: E(): 3.8e-164, 33.54% id in 3258 aa, and to Yersinia pestis putative adhesin Ypo0599 or y3579 SWALL:Q8ZIA8 (EMBL:AJ414143) (3295 aa) fasta scores: E(): 3.1e-62, 30.38% id in 3383 aa.
  
     0.669
BPSS0543
Similar to Acetobacter diazotrophicus levansucrase precursor LsdA SWALL:SACB_ACEDI (SWALL:Q43998) (584 aa) fasta scores: E(): 4.8e-129, 66.8% id in 476 aa, and to Arthrobacter sp. K-1 beta-fructofuranosidase Bff SWALL:Q8VW87 (EMBL:AB062134) (578 aa) fasta scores: E(): 7.6e-109, 56.27% id in 526 aa; Belongs to the glycosyl hydrolase 68 family.
  
     0.663
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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