STRINGSTRING
BPSS1506 BPSS1506 BPSS1505 BPSS1505 BPSS1504 BPSS1504 BPSS1507 BPSS1507 BPSS1503 BPSS1503 BPSS1501 BPSS1501 BPSS1500 BPSS1500 BPSS1502 BPSS1502 BPSS1499 BPSS1499 BPSS1498 BPSS1498 BPSS1508 BPSS1508
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS1506Putative exported protein; Weakly similar to Rhizobium loti hypothetical protein Mlr1970 SWALL:Q98JF2 (EMBL:AP002998) (211 aa) fasta scores: E(): 5.6, 29.57% id in 186 aa. (250 aa)    
Predicted Functional Partners:
BPSS1505
Hypothetical protein; N-terminal region is weakly similar to Synechocystis sp. hypothetical protein SLR1819 SWALL:YI19_SYNY3 (SWALL:P73709) (331 aa) fasta scores: E(): 1.1e-15, 28.8% id in 309 aa.
       0.780
BPSS1504
Putative exported protein; Similar over its C-terminal region to Chlorobium tepidum pentapeptide repeat family protein ct1045 SWALL:AAM72278 (EMBL:AE012867) (549 aa) fasta scores: E(): 1.5e-08, 32.65% id in 346 aa, and to Caulobacter crescentus pentapeptide repeat family protein cc0587 SWALL:Q9AAL0 (EMBL:AE005733) (371 aa) fasta scores: E(): 2.2e-08, 32.08% id in 321 aa.
       0.771
BPSS1507
Hypothetical protein; Weakly similar to Yersinia pestis hypothetical protein ypo0511a or y3662 SWALL:Q8ZII6 (EMBL:AJ414143) (121 aa) fasta scores: E(): 0.57, 28.84% id in 104 aa.
       0.688
BPSS1503
Hypothetical protein; Similar over its N-terminal half to Pseudomonas aeruginosa hypothetical protein Pa5266 SWALL:Q9HTT3 (EMBL:AE004939) (691 aa) fasta scores: E(): 3.8e-32, 30.61% id in 503 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 1.5e-31, 26.39% id in 629 aa.
       0.656
BPSS1501
Similar to Pseudomonas aeruginosa hypothetical protein Pa1661 pa1661 SWALL:Q9I364 (EMBL:AE004594) (335 aa) fasta scores: E(): 9e-25, 31.56% id in 320 aa, and to Xanthomonas axonopodis hypothetical protein Xac4141 xac4141 SWALL:AAM38976 (EMBL:AE012064) (346 aa) fasta scores: E(): 3.3e-21, 31.76% id in 318 aa.
       0.588
BPSS1500
Similar to Vibrio cholerae hypothetical protein Vca0110 SWALL:Q9KN55 (EMBL:AE004353) (589 aa) fasta scores: E(): 1.4e-37, 33.77% id in 598 aa, and to Yersinia pestis hypothetical protein ypo1485 or y2684 SWALL:Q8ZG34 (EMBL:AJ414148) (587 aa) fasta scores: E(): 2.5e-37, 33.39% id in 587 aa.
       0.585
BPSS1502
Putative Clp-type ATPase chaperone protein; Similar to Yersinia enterocolitica clp protease-associated protein ClpB SWALL:Q9F746 (EMBL:AF285784) (890 aa) fasta scores: E(): 7.8e-55, 41.06% id in 962 aa, and to Ralstonia solanacearum putative ClpA/B-type chaperone protein rsp0749 or rs01959 SWALL:Q8XRT2 (EMBL:AL646080) (905 aa) fasta scores: E(): 4.1e-66, 47.08% id in 962 aa; Belongs to the ClpA/ClpB family.
       0.575
BPSS1499
Similar to Pseudomonas aeruginosa hypothetical protein Pa1659 SWALL:Q9I366 (EMBL:AE004593) (135 aa) fasta scores: E(): 0.00057, 29.24% id in 106 aa, and to Yersinia pestis hypothetical protein Ypo1488 SWALL:Q8ZG31 (EMBL:AJ414148) (150 aa) fasta scores: E(): 0.00084, 30.76% id in 117 aa.
       0.533
BPSS1498
Similar to Yersinia pestis hypothetical protein ypo1470 or ypo0973 or y2700 or y3363 SWALL:Q8XGB3 (EMBL:AJ414148) (163 aa) fasta scores: E(): 0.0042, 24.84% id in 161 aa, and to Pseudomonas aeruginosa secreted protein Hcp (HcpB or pa5267) and (HcpC or pa0263) and (hc or pa1512) SWALL:Q9HI36 (EMBL:AE004939) (172 aa) fasta scores: E(): 0.013, 25.14% id in 175 aa.
       0.503
BPSS1508
Hypothetical protein; Weakly similar to Ralstonia solanacearum putative transmembrane protein rsp0741 or rs01967 SWALL:Q8XRU0 (EMBL:AL646080) (193 aa) fasta scores: E(): 1.8, 25.52% id in 192 aa.
       0.486
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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