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BPSS1512 BPSS1512 BPSS1513 BPSS1513 folE-2 folE-2 BPSL2150 BPSL2150 BPSS0180 BPSS0180 BPSS1521 BPSS1521 BPSS2096 BPSS2096 BPSL0707 BPSL0707 bopA bopA BPSS1520 BPSS1520 BPSL1929 BPSL1929
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS1512Putative membrane protein; No significant database matches. (474 aa)    
Predicted Functional Partners:
BPSS1513
Hypothetical protein; No significant database matches. Doubtful CDS.
     
 0.592
folE-2
Similar to Bacillus subtilis GTP cyclohydrolase I FolE or MtrA SWALL:GCH1_BACSU (SWALL:P19465) (190 aa) fasta scores: E(): 2.9e-19, 33.33% id in 189 aa, and to Ralstonia solanacearum GTP cyclohydrolase I FolE or rsc1387 or rs04670 SWALL:Q8XZK8 (EMBL:AL646064) (209 aa) fasta scores: E(): 7.5e-67, 84.12% id in 189 aa.
     
 0.528
BPSL2150
Putative outer membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc1413 or rs05279 SWALL:Q8XZI2 (EMBL:AL646064) (184 aa) fasta scores: E(): 6.5e-32, 71.25% id in 160 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 histone-like protein HLP-1 precursor HlpA or Skp or OmpH or b0178 or c0215 or z0190 or ecs0180 SWALL:HLPA_ECOLI (SWALL:P11457) (161 aa) fasta scores: E(): 1.3e-05, 35.44% id in 158 aa; Belongs to the skp family.
      
 0.457
BPSS0180
Conserved hypothetical protein; Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium putative cytoplasmic protein stm0266 or SciA SWALL:Q93IT5 (EMBL:AE008707) (351 aa) fasta scores: E(): 1.7e-34, 45.33% id in 364 aa, and to Yersinia pestis hypothetical protein ypo2949 SWALL:Q8ZCN2 (EMBL:AJ414154) (393 aa) fasta scores: E(): 5.7e-20, 30.53% id in 393 aa. Note: Also similar to BPSS0110 (357 aa) fasta scores: E(): 1.3e-23, 44.101% identity in 356 aa overlap.
      
 0.457
BPSS1521
Hypothetical protein; Weakly similar to Myxococcus xanthus putative sigma-54 dependent transcriptional activator 221_mxA SWALL:Q50874 (EMBL:U49156) (140 aa) fasta scores: E(): 3.3, 27.88% id in 104 aa.
      
 0.410
BPSS2096
Similar to Pseudomonas aeruginosa hypothetical protein pa0088 SWALL:Q9I744 (EMBL:AE004447) (619 aa) fasta scores: E(): 4.4e-110, 47.77% id in 628 aa, and to Xanthomonas axonopodis hypothetical protein xac4142 SWALL:AAM38977 (EMBL:AE012064) (627 aa) fasta scores: E(): 9.1e-109, 46.74% id in 629 aa.
      
 0.408
BPSL0707
Conserved hypothetical protein; Similar to Burkholderia cepacia cholesterol oxidase ChoS SWALL:Q93RE1 (EMBL:AB051407) (582 aa) fasta scores: E(): 6.7e-158, 66.83% id in 579 aa, and to Pseudomonas aeruginosa hypothetical protein PA4140 SWALL:Q9HWP1 (EMBL:AE004830) (597 aa) fasta scores: E(): 4.3e-132, 56.02% id in 589 aa.
      
 0.407
bopA
Putative intercellular spread protein; Plays a role in mediating bacterial evasion from the host autophagic pathway; Belongs to the BopA/IcsB family.
      
 0.404
BPSS1520
Weakly similar to Streptomyces coelicolor putative regulatory protein sco5017 or sck15.19 SWALL:Q9KY85 (EMBL:AL939122) (365 aa) fasta scores: E(): 4e-11, 28.89% id in 353 aa, and Pseudomonas aeruginosa probable transcriptional regulator pa4094 SWALL:Q9HWT4 (EMBL:AE004825) (319 aa) fasta scores: E(): 2e-09, 26.93% id in 323 aa.
      
 0.402
BPSL1929
Putative exported protein; Very low similarities to database matches. Similar to Ralstonia solanacearum probable signal peptide protein rsc2280 or rs01277 SWALL:Q8XX38 (EMBL:AL646069) (91 aa) fasta scores: E(): 2.1, 40.44% id in 89 aa.
      
 0.400
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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