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BPSS1735 BPSS1735 BPSS1736 BPSS1736 BPSL0108 BPSL0108 BPSS1737 BPSS1737 potF potF BPSS1738 BPSS1738 BPSL1650 BPSL1650 potF-2 potF-2 BPSS0077 BPSS0077 BPSL1649 BPSL1649 BPSL1652 BPSL1652
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS1735Similar to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1731 or rs02919 SWALL:Q8XYM7 (EMBL:AL646066) (272 aa) fasta scores: E(): 4.3e-87, 86.76% id in 272 aa, and to Yersinia pestis putative ABC transporter permease ypo2841 SWALL:Q8ZCW7 (EMBL:AJ414154) (282 aa) fasta scores: E(): 7.7e-54, 56.56% id in 274 aa. Note: This CDS is longer in its N-terminal region than most of its database matches. (279 aa)    
Predicted Functional Partners:
BPSS1736
Similar to Ralstonia solanacearum probable transport system permease transmembrane protein rsc1732 or rs02920 SWALL:Q8XYM6 (EMBL:AL646066) (420 aa) fasta scores: E(): 1.2e-125, 80.52% id in 416 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa0605 SWALL:Q9I5T3 (EMBL:AE004497) (415 aa) fasta scores: E(): 8.9e-92, 59.33% id in 423 aa.
  
 0.968
BPSL0108
Putative extracellular solute-binding lipoprotein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
  
 0.938
BPSS1737
Putative ABC transport system, exported protein; Similar to Ralstonia solanacearum putative lipoprotein signal peptide rsc1733 or rs02921 SWALL:Q8XYM5 (EMBL:AL646066) (346 aa) fasta scores: E(): 2.4e-116, 86.09% id in 338 aa, and to Pseudomonas putida polyamine ABC transporter, periplasmic polyamine-binding protein pp0412 SWALL:AAN66042 (EMBL:AE016775) (344 aa) fasta scores: E(): 2.2e-84, 62.09% id in 343 aa.
 
  
 0.922
potF
Putrescine-binding periplasmic protein precursor; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
  
 0.910
BPSS1738
Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1734 or rs02922 SWALL:Q8XYM4 (EMBL:AL646066) (363 aa) fasta scores: E(): 1.8e-102, 80.82% id in 365 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa0603 SWALL:Q9I5T5 (EMBL:AE004496) (369 aa) fasta scores: E(): 2e-69, 59.94% id in 362 aa.
  
 0.900
BPSL1650
Similar to Escherichia coli spermidine/putrescine transport system permease protein PotB or b1125 SWALL:POTB_ECOLI (SWALL:P23860) (275 aa) fasta scores: E(): 8.4e-25, 35.57% id in 253 aa, and to Rhizobium meliloti putative ABC transporter, permease protein ra0434 or sma0800 SWALL:Q92ZM1 (EMBL:AE007234) (291 aa) fasta scores: E(): 1.5e-66, 66.07% id in 280 aa.
  
0.897
potF-2
Putrescine ABC transport system, binding exported protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
  
 0.891
BPSS0077
Putative ABC transport system, exported substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
  
 0.872
BPSL1649
Putative ABC transport system, substrate-binding protein; Similar to Escherichia coli spermidine/putrescine-binding periplasmic protein precursor PotD or b1123 SWALL:POTD_ECOLI (SWALL:P23861) (348 aa) fasta scores: E(): 5.8e-12, 26.25% id in 320 aa, to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu4243 or agr_l_1237 SWALL:Q8U856 (EMBL:AE009353) (336 aa) fasta scores: E(): 6.2e-86, 63.09% id in 336 aa, and to Rhizobium meliloti putative ABC transporter, periplasmic solute-binding protein ra0433 or sma0799 SWALL:Q92ZM2 (EMBL:AE007234) (319 aa) fasta scores: E(): [...]
 
  
 0.825
BPSL1652
Similar to Escherichia coli putrescine transport ATP-binding protein PotG or b0855 SWALL:POTG_ECOLI (SWALL:P31134) (377 aa) fasta scores: E(): 7.7e-42, 41.14% id in 350 aa, and to Rhizobium meliloti putative ABC-transporter ATP-binding protein ra0436 or sma0803 SWALL:Q92ZL9 (EMBL:AE007234) (359 aa) fasta scores: E(): 1.6e-71, 60.27% id in 360 aa.
  
 0.798
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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