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BPSS1737 BPSS1737 BPSS1736 BPSS1736 BPSS1735 BPSS1735 BPSS1738 BPSS1738 BPSL1651 BPSL1651 BPSL1650 BPSL1650 BPSS0075 BPSS0075 potH-2 potH-2 potH potH potI-2 potI-2 potI potI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BPSS1737Putative ABC transport system, exported protein; Similar to Ralstonia solanacearum putative lipoprotein signal peptide rsc1733 or rs02921 SWALL:Q8XYM5 (EMBL:AL646066) (346 aa) fasta scores: E(): 2.4e-116, 86.09% id in 338 aa, and to Pseudomonas putida polyamine ABC transporter, periplasmic polyamine-binding protein pp0412 SWALL:AAN66042 (EMBL:AE016775) (344 aa) fasta scores: E(): 2.2e-84, 62.09% id in 343 aa. (348 aa)    
Predicted Functional Partners:
BPSS1736
Similar to Ralstonia solanacearum probable transport system permease transmembrane protein rsc1732 or rs02920 SWALL:Q8XYM6 (EMBL:AL646066) (420 aa) fasta scores: E(): 1.2e-125, 80.52% id in 416 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa0605 SWALL:Q9I5T3 (EMBL:AE004497) (415 aa) fasta scores: E(): 8.9e-92, 59.33% id in 423 aa.
 
  
 0.935
BPSS1735
Similar to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1731 or rs02919 SWALL:Q8XYM7 (EMBL:AL646066) (272 aa) fasta scores: E(): 4.3e-87, 86.76% id in 272 aa, and to Yersinia pestis putative ABC transporter permease ypo2841 SWALL:Q8ZCW7 (EMBL:AJ414154) (282 aa) fasta scores: E(): 7.7e-54, 56.56% id in 274 aa. Note: This CDS is longer in its N-terminal region than most of its database matches.
 
  
 0.922
BPSS1738
Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1734 or rs02922 SWALL:Q8XYM4 (EMBL:AL646066) (363 aa) fasta scores: E(): 1.8e-102, 80.82% id in 365 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa0603 SWALL:Q9I5T5 (EMBL:AE004496) (369 aa) fasta scores: E(): 2e-69, 59.94% id in 362 aa.
 
  
 0.906
BPSL1651
Putative ABC transport system, permease protein; Similar to Escherichia coli, and Escherichia coli O157:H7 spermidine/putrescine transport system permease protein PotC or b1124 or z1763 or ecs1500 SWALL:POTC_ECOLI (SWALL:P23859) (264 aa) fasta scores: E(): 5.5e-19, 29.13% id in 254 aa, and to Rhizobium meliloti putative ABC transporter, permease protein ra0435 or sma0802 SWALL:Q92ZM0 (EMBL:AE007234) (266 aa) fasta scores: E(): 1.5e-64, 66.41% id in 262 aa.
 
  
 0.763
BPSL1650
Similar to Escherichia coli spermidine/putrescine transport system permease protein PotB or b1125 SWALL:POTB_ECOLI (SWALL:P23860) (275 aa) fasta scores: E(): 8.4e-25, 35.57% id in 253 aa, and to Rhizobium meliloti putative ABC transporter, permease protein ra0434 or sma0800 SWALL:Q92ZM1 (EMBL:AE007234) (291 aa) fasta scores: E(): 1.5e-66, 66.07% id in 280 aa.
 
  
 0.670
BPSS0075
Putative ABC transport system, membrane protein; Similar to Escherichia coli spermidine/putrescine transport system permease protein PotB or b1125 SWALL:POTB_ECOLI (SWALL:P23860) (275 aa) fasta scores: E(): 7.8e-29, 34.69% id in 245 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa0325 SWALL:Q9I6G6 (EMBL:AE004470) (309 aa) fasta scores: E(): 3.4e-49, 49.08% id in 273 aa.
 
  
 0.537
potH-2
Similar to Escherichia coli putrescine transport system permease protein PotH or b0856 SWALL:POTH_ECOLI (SWALL:P31135) (317 aa) fasta scores: E(): 8.1e-65, 55.98% id in 284 aa, and to Yersinia pestis putrescine transport system permease protein ypo1333 or y2848 SWALL:AAM86399 (EMBL:AJ414147) (321 aa) fasta scores: E(): 4.5e-67, 53.72% id in 322 aa. Note: This CDS has a possible aternative star codon at residue 44.
 
  
 0.531
potH
Similar to Escherichia coli putrescine transport system permease protein PotH or b0856 SWALL:POTH_ECOLI (SWALL:P31135) (317 aa) fasta scores: E(): 3.3e-68, 59.85% id in 284 aa, and to Xanthomonas axonopodis polyamine transport protein xac2471 SWALL:AAM37322 (EMBL:AE011884) (288 aa) fasta scores: E(): 2e-69, 62.1% id in 285 aa.
 
  
 0.529
potI-2
Similar to Escherichia coli, and Escherichia coli O6 putrescine transport system permease protein PotI or b0857 or c0990 SWALL:POTI_ECOLI (SWALL:P31136) (281 aa) fasta scores: E(): 2.4e-56, 58.86% id in 265 aa, and to Salmonella typhi putrescine transport system permease protein sty0913 SWALL:Q8Z843 (EMBL:AL627268) (281 aa) fasta scores: E(): 4.5e-55, 57.35% id in 265 aa. Note: This CDS is longer in its C-terminal region than most of its database matches.
 
  
 0.489
potI
Similar to Escherichia coli putrescine transport system permease protein PotI or b0857 SWALL:POTI_ECOLI (SWALL:P31136) (281 aa) fasta scores: E(): 6.8e-60, 59% id in 261 aa, and to Yersinia pestis putrescine transport system permease protein ypo1334 SWALL:Q8ZGG3 (EMBL:AJ414147) (281 aa) fasta scores: E(): 3.5e-59, 56.7% id in 261 aa.
 
  
 0.482
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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