STRINGSTRING
BPSS1742 BPSS1742 BPSS0368 BPSS0368 BPSL2589 BPSL2589 tolA tolA BPSS0962 BPSS0962 BPSL1528 BPSL1528 BPSL3349 BPSL3349 BPSL1563 BPSL1563 BPSS1743 BPSS1743 BPSL2724 BPSL2724 BPSL2721 BPSL2721
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS1742Similar to Pseudomonas putida outer membrane copper receptor OprC or pp4838 SWALL:AAN70407 (EMBL:AE016792) (688 aa) fasta scores: E(): 5.8e-81, 59.23% id in 655 aa, and to Pseudomonas stutzeri outer membrane protein NosA SWALL:Q8KLV2 (EMBL:AJ507426) (719 aa) fasta scores: E(): 9e-71, 49.48% id in 675 aa. (749 aa)    
Predicted Functional Partners:
BPSS0368
Putative TonB-like transport protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.748
BPSL2589
Putative lipoprotein; No significant database matches.
  
 
 0.709
tolA
Possible TolA-related transport transmembrane protein; Similar to Pseudomonas aeruginosa TolA protein TolA or pa0971 SWALL:TOLA_PSEAE (SWALL:P50600) (347 aa) fasta scores: E(): 0.00074, 30.72% id in 319 aa, and to Ralstonia solanacearum probable TolA-related transport transmembrane protein TolA or rsc0734 or rs05119 SWALL:Q8Y1F6 (EMBL:AL646060) (345 aa) fasta scores: E(): 1.1e-22, 45.56% id in 338 aa, and to Xanthomonas campestris TolA protein TolA or xcc3019 SWALL:Q8P6F1 (EMBL:AE012415) (345 aa) fasta scores: E(): 1.4e-05, 26.95% id in 345 aa.
  
 
 0.709
BPSS0962
Weakly similar to Serratia marcescens extracellular serine protease precursor SWALL:PRTT_SERMA (SWALL:P29805) (1045 aa) fasta scores: E(): 2.8e-32, 29.08% id in 1193 aa, and to Pseudomonas fluorescens serine protease homologue PspB SWALL:Q9ZNI5 (EMBL:AB015053) (1036 aa) fasta scores: E(): 8.4e-71, 36.9% id in 1176 aa. Autotransporter protein.
  
 
 
 0.707
BPSL1528
Putative exported protein; Similar to Ralstonia solanacearum hypothetical protein RSC1624or RS03987 SWALL:Q8XYY2 (EMBL:AL646065) (253 aa) fasta scores: E(): 9.7e-23, 43.29% id in 231 aa.
  
 
 0.683
BPSL3349
Putative membrane protein; No significant database matches. Contains 14 x NPTG repeat at residues 413-468.
  
 
 0.683
BPSL1563
Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein pa2784 SWALL:Q9I059 (EMBL:AE004706) (185 aa) fasta scores: E(): 3e-30, 51.06% id in 188 aa.
  
     0.618
BPSS1743
Putative exported protein; No significant database matches.
       0.610
BPSL2724
Putative TonB-dependent outer-membrane receptor protein; Similar to Xanthomonas axonopodis TonB-dependent receptor FhuA or xac4062 SWALL:Q8PFC1 (EMBL:AE012054) (726 aa) fasta scores: E(): 8.7e-33, 30.99% id in 742 aa, Anabaena sp. ferrichrome-iron receptor all2148 SWALL:Q8YV33 (EMBL:AP003588) (863 aa) fasta scores: E(): 5.7e-28, 26.62% id in 725 aa and to Salmonella typhimurium ferrioxamine B receptor precursor FoxA or Stm0364 SWALL:FOXA_SALTY (SWALL:Q56145) (702 aa) fasta scores: E(): 7.4e-23, 24.6% id in 687 aa.
 
  
 0.602
BPSL2721
FecCD-family membrane transporter protein; Similar to Pseudomonas aeruginosa probable permease of ABC transporter pa2914 SWALL:Q9HZT3 (EMBL:AE004717) (343 aa) fasta scores: E(): 1.2e-56, 55.78% id in 346 aa and to Rhizobium loti ABC transporter, permease protein mlr8229 SWALL:Q983Q1 (EMBL:AP003013) (349 aa) fasta scores: E(): 6.5e-44, 46.7% id in 364 aa; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.582
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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