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BPSS1824 BPSS1824 BPSL2782 BPSL2782 BPSS1424 BPSS1424 BPSS0546 BPSS0546 BPSL0819 BPSL0819 fbp-2 fbp-2 pchR pchR BPSS1322 BPSS1322 BPSS1020 BPSS1020 BPSS1714 BPSS1714 FtrA FtrA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Textmining
[Homology]
Score
BPSS1824Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3220 SWALL:Q9HZ20 (EMBL:AE004745) (254 aa) fasta scores: E(): 3.8e-21, 37.4% id in 254 aa, and to Photobacterium leiognathi probable transcriptional regulator LumQ SWALL:LUMQ_PHOLE (SWALL:Q51872) (248 aa) fasta scores: E(): 9.7e-13, 24.59% id in 248 aa. (255 aa)    
Predicted Functional Partners:
BPSL2782
Putative AraC family transcriptional regulator; Similar to Mycobacterium smegmatis AdpA-like protein SWALL:Q9KX52 (EMBL:U20115) (308 aa) fasta scores: E(): 1.3e-11, 31.08% id in 222 aa, and to Caulobacter crescentus transcriptional regulator, AraC family cc3367 SWALL:Q9A339 (EMBL:AE005998) (324 aa) fasta scores: E(): 3.9e-09, 29.81% id in 322 aa, and to Streptomyces coelicolor putative transcriptional regulator sco2329 or scc53.20C SWALL:Q9KXJ1 (EMBL:AL357591) (320 aa) fasta scores: E(): 4.5e-09, 29.44% id in 326 aa.
  
   0.771
BPSS1424
Putative AraC transcriptional regulatory protein; Similar to Pseudomonas syringae arginine pathway regulatory protein ArgR SWALL:Q8VVB2 (EMBL:AF443787) (354 aa) fasta scores: E(): 4.9e-35, 40% id in 315 aa, and to Ralstonia solanacearum probable transcriptional regulator protein rsp0068 or rs02043 SWALL:Q8XTN8 (EMBL:AL646076) (334 aa) fasta scores: E(): 2.1e-97, 76.2% id in 332 aa, and to Ralstonia solanacearum probable transcriptional regulator protein rsp0054 or rs02029 SWALL:Q8XTQ2 (EMBL:AL646076) (343 aa) fasta scores: E(): 2.4e-67, 56.82% id in 315 aa.
  
   0.674
BPSS0546
AraC family regulatory protein; Similar to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein rsp0054 or rs02029 SWALL:Q8XTQ2 (EMBL:AL646076) (343 aa) fasta scores: E(): 5.7e-114, 85.71% id in 336 aa, and to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein rsp0068 or rs02043 SWALL:Q8XTN8 (EMBL:AL646076) (334 aa) fasta scores: E(): 1.5e-65, 55.12% id in 312 aa. Similar to BPSS1424, 56.913% identity (57.097% ungapped) in 311 aa overlap.
  
   0.665
BPSL0819
AraC family transcriptional regulator; Similar to Streptomyces griseus A-factor-responsive transcriptional activator AdpA SWALL:Q9S166 (EMBL:AB023785) (405 aa) fasta scores: E(): 2.1e-30, 36.33% id in 322 aa, and to Streptomyces coelicolor putative transcriptional regulator sco6746 or sc5f2a.29 SWALL:Q9X7Q2 (EMBL:AL049587) (325 aa) fasta scores: E(): 2.9e-43, 41.94% id in 329 aa; Alternative start site at codon 33; upstream repeat region (ggcgc)3.
  
   0.606
fbp-2
Similar to Neisseria meningitidis peptidyl-prolyl cis-trans isomerase Fbp or nmb0027 SWALL:FKBP_NEIMB (SWALL:P25138) (109 aa) fasta scores: E(): 2.6e-24, 66.66% id in 105 aa, and to Neurospora crassa FK506-binding protein 9g6.180 SWALL:FKBP_NEUCR (SWALL:P20080) (120 aa) fasta scores: E(): 1.3e-19, 53.5% id in 114 aa.
     
 0.600
pchR
Similar to Pseudomonas aeruginosa AraC family activator of pyochelin and ferripyochelin receptor synthesis PchR SWALL:PCHR_PSEAE (SWALL:P40883) (296 aa) fasta scores: E(): 1.4e-78, 67.34% id in 297 aa.
  
     0.597
BPSS1322
Putative AraC family transcriptional regulatory protein; Similar to Lactococcus lactis xylose regulatory protein XylR SWALL:Q9X421 (EMBL:AF092042) (319 aa) fasta scores: E(): 3.4e-05, 20.28% id in 281 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3269 SWALL:Q9HYX2 (EMBL:AE004749) (284 aa) fasta scores: E(): 7e-24, 33.81% id in 275 aa, and to Agrobacterium tumefaciens transcriptional regulator, AraC family atu1081 or agr_c_1998 SWALL:Q8UGF7 (EMBL:AE009072) (285 aa) fasta scores: E(): 3e-23, 33.08% id in 272 aa.
  
     0.596
BPSS1020
Putative AraC family transcriptional regulator; Similar to Bacillus sp. GL1 protein Orf1 SWALL:Q9RC93 (EMBL:AB019619) (297 aa) fasta scores: E(): 8.1e-06, 27.88% id in 269 aa, to codon 279 and to Streptococcus pyogenes putative two-component response regulator Spy1556 SWALL:Q99YT2 (EMBL:AE006588) (246 aa) fasta scores: E(): 4.3e-07, 40.2% id in 97 aa, from codon 209 to codon 301 and to Citrobacter freundii arabinose operon regulatory protein araC SWALL:ARAC_CITFR (SWALL:P11765) (281 aa) fasta scores: E(): 6.3e-07, 38.23% id in 102 aa from codon 194 to codon 296.
  
     0.553
BPSS1714
Similar to Agrobacterium tumefaciens transcriptional regulator, AraC family atu4297 or agr_l_1135 SWALL:Q8U802 (EMBL:AE009358) (313 aa) fasta scores: E(): 4.8e-31, 39.72% id in 287 aa, and to Vibrio cholerae transcriptional regulator, AraC/XylS family vc1260 SWALL:Q9KSJ6 (EMBL:AE004205) (299 aa) fasta scores: E(): 3.8e-21, 30.36% id in 303 aa.
  
     0.542
FtrA
AraC family regulatory protein; Similar to Rhizobium loti transcriptional regulator mll3844 SWALL:Q98FC1 (EMBL:AP003002) (332 aa) fasta scores: E(): 4.9e-64, 55.91% id in 313 aa, and to Caulobacter crescentus AraC family transcriptional regulator CC3367 SWALL:Q9A339 (EMBL:AE005998) (324 aa) fasta scores: E(): 3.5e-63, 55.76% id in 312 aa.
  
   0.511
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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