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BPSS1838 BPSS1838 BPSS1837 BPSS1837 BPSS1839 BPSS1839 BPSL2842 BPSL2842 BPSL2293 BPSL2293 BPSS0322 BPSS0322 glcD glcD BPSS0323 BPSS0323 BPSL2461 BPSL2461 BPSS0361 BPSS0361 BPSS1318 BPSS1318
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BPSS1838Putative ferredoxin; Similar to Escherichia coli, and Escherichia coli O157:H7 anaerobic glycerol-3-phosphate dehydrogenase subunit C GlpC or b2243 or z3501 or ecs3128 SWALL:GLPC_ECOLI (SWALL:P13034) (396 aa) fasta scores: E(): 3e-22, 28.08% id in 413 aa, and to Salmonella typhimurium SN-glycerol-3-phosphate dehydrogenase stm2286 SWALL:Q8ZNG3 (EMBL:AE008802) (396 aa) fasta scores: E(): 1.3e-22, 28.7% id in 418 aa. (445 aa)    
Predicted Functional Partners:
BPSS1837
Similar to Sulfolobus tokodaii hypothetical protein st2368 SWALL:Q96XZ9 (EMBL:AP000989) (188 aa) fasta scores: E(): 2.4e-09, 32.11% id in 137 aa, and to Sulfolobus solfataricus hypothetical protein sso2644 SWALL:Q97VH9 (EMBL:AE006859) (188 aa) fasta scores: E(): 3.9e-07, 32.84% id in 137 aa.
     0.979
BPSS1839
Putative oxidative stress related rubrerythrin protein; Similar to the N-terminal region of Porphyromonas gingivalis rubrerythrin Rr or Rbr SWALL:RUBY_PORGI (SWALL:Q9AGG3) (200 aa) fasta scores: E(): 2.8e-17, 46.09% id in 141 aa, and of Desulfovibrio vulgaris rubrerythrin Rr SWALL:RUBY_DESVH (SWALL:P24931) (191 aa) fasta scores: E(): 5.8e-16, 45.58% id in 136 aa. Note: The C-terminal region of the database matches belongs to the rubredoxin family; this CDS presents no similarities to this region.
 
  
 0.907
BPSL2842
Putative FAD-binding oxidase; Similar to Escherichia coli, and Escherichia coli O6 glycolate oxidase subunit GlcD or Gox or b2979 or c3709 SWALL:GLCD_ECOLI (SWALL:P52075) (499 aa) fasta scores: E(): 1.3e-37, 32.22% id in 419 aa, and to the C-terminal region of Saccharomyces cerevisiae D-lactate dehydrogenase [cytochrome], mitochondrial precursor Dld1 or Dld or ydl174C SWALL:DLD1_YEAST (SWALL:P32891) (587 aa) fasta scores: E(): 1.6e-60, 43.34% id in 436 aa.
 
  
 0.685
BPSL2293
Similar to Ralstonia solanacearum putative iron-sulfur binding protein rsc1612 or rs03975 SWALL:Q8XYZ4 (EMBL:AL646065) (469 aa) fasta scores: E(): 7.4e-134, 75.31% id in 474 aa, and to Bacillus halodurans hypothetical protein bh1833 SWALL:Q9KBU1 (EMBL:AP001513) (485 aa) fasta scores: E(): 1.1e-65, 39.95% id in 488 aa.
 
 0.680
BPSS0322
Similar to Ralstonia solanacearum putative iron-sulfur binding protein rsc1612 or rs03975 SWALL:Q8XYZ4 (EMBL:AL646065) (469 aa) fasta scores: E(): 3.2e-76, 46.45% id in 465 aa, and to Pasteurella multocida hypothetical protein pm1854 SWALL:Q9CJY4 (EMBL:AE006223) (467 aa) fasta scores: E(): 9.4e-67, 41.59% id in 464 aa.
 
 
 0.680
glcD
Similar to Escherichia coli, and Escherichia coli O6 glycolate oxidase subunit GlcD or Gox or b2979 or c3709 SWALL:GLCD_ECOLI (SWALL:P52075) (499 aa) fasta scores: E(): 4.2e-114, 59.91% id in 479 aa, and to Ralstonia solanacearum probable glycolate oxidase or rsc2666 or rs04539 SWALL:Q8XW09 (EMBL:AL646071) (497 aa) fasta scores: E(): 6e-152, 76.45% id in 497 aa, and to Pseudomonas aeruginosa glycolate oxidase subunit GlcD or pa5355 SWALL:Q9HTK3 (EMBL:AE004947) (499 aa) fasta scores: E(): 4.8e-115, 61.99% id in 471 aa.
 
  
 0.642
BPSS0323
Hypothetical protein; C-terminus is similar to the C-terminal regions of Ralstonia solanacearum putative transmembrane protein rsc1032 or rs04218 SWALL:Q8Y0L1 (EMBL:AL646062) (243 aa) fasta scores: E(): 7.3e-15, 41.11% id in 180 aa, and Bacillus subtilis YvbY protein SWALL:O32259 (EMBL:Z99121) (240 aa) fasta scores: E(): 3.6e-07, 30.86% id in 162 aa.
 
 
 0.626
BPSL2461
Conserved hypothetical protein; Similar to Ralstonia solanacearum putative transmembrane protein rsc1032 or rs04218 SWALL:Q8Y0L1 (EMBL:AL646062) (243 aa) fasta scores: E(): 6.5e-49, 60.96% id in 228 aa, and to Bacillus halodurans hypothetical protein bh1834 SWALL:Q9KBU0 (EMBL:AP001513) (230 aa) fasta scores: E(): 4.3e-08, 30.38% id in 237 aa.
 
 
 0.623
BPSS0361
Conserved hypothetical protein; Similar to Escherichia coli, and Escherichia coli O6 protein GlcG or b2977 or c3706 SWALL:GLCG_ECOLI (SWALL:P45504) (134 aa) fasta scores: E(): 1.9e-20, 49.24% id in 132 aa, and to Pseudomonas aeruginosa hypothetical protein pa5352 SWALL:Q9HTK6 (EMBL:AE004947) (133 aa) fasta scores: E(): 6.9e-22, 53.38% id in 133 aa.
  
  
 0.549
BPSS1318
Similar to Saccharomyces cerevisiae D-lactate dehydrogenase [cytochrome], mitochondrial precursor DlD1 or Dld or ydl174C SWALL:DLD1_YEAST (SWALL:P32891) (587 aa) fasta scores: E(): 1.6e-53, 37.01% id in 489 aa, and to Ralstonia solanacearum putative D-lactate dehydrogenase Dld or rsc2664 or rs04542 SWALL:Q8XW11 (EMBL:AL646071) (472 aa) fasta scores: E(): 1.1e-101, 58.98% id in 451 aa, and to Rhizobium loti probable D-lactate dehydrogenase mll1488 SWALL:Q98KG4 (EMBL:AP002997) (575 aa) fasta scores: E(): 2.4e-99, 56.4% id in 445 aa. Possible alternative translational start.
 
  
 0.519
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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