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BPSS1853 BPSS1853 BPSL1746 BPSL1746 BPSL0379 BPSL0379 BPSL2229 BPSL2229 BPSS1269 BPSS1269 BPSS1854 BPSS1854 BPSL1712 BPSL1712 BPSS1197 BPSS1197 BPSS0843 BPSS0843 BPSS1857 BPSS1857 BPSS1852 BPSS1852
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BPSS1853Putative dehydrogenase; Similar to Pseudomonas paucimobilis 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX SWALL:LINX_PSEPA (SWALL:P50198) (250 aa) fasta scores: E(): 3.3e-24, 37.64% id in 255 aa, and to Escherichia coli oxidoreductase UcpA o b2426 SWALL:UCPA_ECOLI (SWALL:P37440) (263 aa) fasta scores: E(): 1.1e-22, 38.67% id in 256 aa. (265 aa)    
Predicted Functional Partners:
BPSL1746
Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa1330 SWALL:Q9I414 (EMBL:AE004562) (259 aa) fasta scores: E(): 1.3e-57, 61.62% id in 258 aa, and to Methanosarcina acetivorans short chain dehydrogenase ma1321 SWALL:Q8TR63 (EMBL:AE010801) (269 aa) fasta scores: E(): 1.2e-41, 46.66% id in 255 aa; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.704
BPSL0379
Putative short chain dehydrogenase; Similar to Streptomyces exfoliatus 20-beta-hydroxysteroid dehydrogenase SWALL:2BHD_STREX (SWALL:P19992) (255 aa) fasta scores: E(): 2.2e-09, 28.86% id in 246 aa, and to Streptomyces albus oxidoreductase homologue SitS SWALL:Q9RPT7 (EMBL:AF145724) (223 aa) fasta scores: E(): 6.8e-34, 49.33% id in 225 aa; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.612
BPSL2229
Similar to Pseudomonas putida siderophore non-ribosomal peptide synthetase PpsD SWALL:Q9AKS6 (EMBL:AJ310530) (2246 aa) fasta scores: E(): 4.8e-102, 28.54% id in 2659 aa, and to the C-terminal region of Pseudomonas syringae syringomycin synthetase SyrE SWALL:O85168 (EMBL:AF047828) (9376 aa) fasta scores: E(): 1.5e-94, 27.02% id in 3648 aa.
  
 
 0.602
BPSS1269
Putative peptide synthase/polyketide synthase; Similar to C-terminus of Aphanizomenon ovalisporum peptide synthetase AoaB SWALL:AAM33468 (EMBL:AF395828) (1869 aa) fasta scores: E(): 5.4e-125, 35.68% id in 1841 aa, and to C-terminus of Stigmatella aurantiaca MtaD SWALL:Q9RFK8 (EMBL:AF188287) (3291 aa) fasta scores: E(): 7.3e-124, 29.54% id in 3368 aa.
  
 
 0.602
BPSS1854
Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa1828 SWALL:Q9I2R7 (EMBL:AE004609) (255 aa) fasta scores: E(): 3.1e-62, 66.66% id in 255 aa, and to Caulobacter crescentus oxidoreductase, short-chain dehydrogenase/reductase family cc3076 SWALL:Q9A3X5 (EMBL:AE005971) (254 aa) fasta scores: E(): 3.1e-29, 39.2% id in 250 aa.
 
    
0.585
BPSL1712
Putative non-ribosomal antibiotic-related peptide synthase; Similar to Pseudomonas syringae syringomycin synthetase SyrE SWALL:O85168 (EMBL:AF047828) (9376 aa) fasta scores: E(): 1.5e-105, 31.93% id in 6198 aa, and to all the domains of Bacillus brevis tyrocidine synthetase III TycC SWALL:TYCC_BACBR (SWALL:O30409) blast scores: E(): 0.0, score: 4799 27% id. Note: Taking into consideration the blastp similarities and all the similarities to the domains in Bacillus brevis TycC, it could be proposed that BSPL1712 possibly incorporates six amino acids (Asn, Gln, Tyr, Val, Orn and Leu) into [...]
  
 
 0.574
BPSS1197
Putative non-ribosomal peptide synthase; Similar to central portion of Ralstonia solanacearum probable peptide synthetase protein rsp0641 or rs05860 SWALL:Q8XS40 (EMBL:AL646079) (6889 aa) fasta scores: E(): 1.4e-124, 33.62% id in 3396 aa, and to N-terminus of Stigmatella aurantiaca StiC protein SWALL:Q8RJY4 (EMBL:AJ421825) (1885 aa) fasta scores: E(): 3.5e-95, 41.69% id in 933 aa, and to N-terminus of Stigmatella aurantiaca StiB protein SWALL:Q8RJY5 (EMBL:AJ421825) (1585 aa) fasta scores: E(): 1.3e-91, 36.35% id in 1268 aa.
  
 
 0.560
BPSS0843
Putative short chain dehydrogenase; Similar to Bacillus megaterium glucose 1-dehydrogenase II GdhII SWALL:DHG2_BACME (SWALL:P39483) (261 aa) fasta scores: E(): 4.2e-10, 30.54% id in 203 aa, and to Pseudomonas aeruginosa probable short chain dehydrogenase pa0117 SWALL:Q9I715 (EMBL:AE004450) (242 aa) fasta scores: E(): 6.2e-30, 41.9% id in 241 aa.
  
 
   0.507
BPSS1857
Putative acyl-CoA dehydrogenase; Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa2550 SWALL:Q9I0T4 (EMBL:AE004683) (409 aa) fasta scores: E(): 6e-103, 63.52% id in 403 aa, and to Rattus norvegicus acyl-CoA dehydrogenase, medium-chain specific, mitochondrial precursor AcaDM SWALL:ACDM_RAT (SWALL:P08503) (421 aa) fasta scores: E(): 9.5e-27, 28.75% id in 400 aa.
  
  0.452
BPSS1852
Putative oxidoreductase; Similar to Pseudomonas aeruginosa probable oxidoreductase pa1648 SWALL:Q9I377 (EMBL:AE004592) (334 aa) fasta scores: E(): 4.9e-54, 46.6% id in 339 aa, and to Rhizobium loti quinone oxidoreductase mlr6843 SWALL:Q987Z3 (EMBL:AP003010) (339 aa) fasta scores: E(): 5.7e-44, 43.1% id in 341 aa.
  
   0.441
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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