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BPSS1857 BPSS1857 BPSS1856 BPSS1856 BPSS1855 BPSS1855 BPSL1235 BPSL1235 BPSS1854 BPSS1854 BPSL1424 BPSL1424 BPSL0419 BPSL0419 BPSL0063 BPSL0063 BPSL0391 BPSL0391 BPSL1237 BPSL1237 BPSS0621 BPSS0621
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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Experiments
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[Homology]
Score
BPSS1857Putative acyl-CoA dehydrogenase; Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa2550 SWALL:Q9I0T4 (EMBL:AE004683) (409 aa) fasta scores: E(): 6e-103, 63.52% id in 403 aa, and to Rattus norvegicus acyl-CoA dehydrogenase, medium-chain specific, mitochondrial precursor AcaDM SWALL:ACDM_RAT (SWALL:P08503) (421 aa) fasta scores: E(): 9.5e-27, 28.75% id in 400 aa. (410 aa)    
Predicted Functional Partners:
BPSS1856
Putative phosphotransferase; Similar to Pseudomonas aeruginosa hypothetical protein pa1829 SWALL:Q9I2R6 (EMBL:AE004609) (356 aa) fasta scores: E(): 2.3e-67, 51.36% id in 331 aa, and to Streptomyces coelicolor putative phosphotransferase sco1689 or sci30a.10 SWALL:Q9S263 (EMBL:AL939109) (341 aa) fasta scores: E(): 1.4e-31, 38.11% id in 328 aa.
 
 0.995
BPSS1855
Phosphoglycerate mutase family protein; Similar to Pseudomonas aeruginosa hypothetical protein pa1831 SWALL:Q9I2R4 (EMBL:AE004609) (236 aa) fasta scores: E(): 1.9e-19, 33.89% id in 236 aa.
 
 
   0.928
BPSL1235
Putative phosphotransferase; Similar to Ralstonia solanacearum hypothetical protein rsc2016 or rs03584 SWALL:Q8XXU7 (EMBL:AL646067) (358 aa) fasta scores: E(): 2e-103, 72.9% id in 358 aa, and to Rhizobium loti hypothetical protein mlr3099 SWALL:Q98GZ9 (EMBL:AP003001) (344 aa) fasta scores: E(): 2.1e-63, 51.89% id in 343 aa.
 
 0.849
BPSS1854
Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa1828 SWALL:Q9I2R7 (EMBL:AE004609) (255 aa) fasta scores: E(): 3.1e-62, 66.66% id in 255 aa, and to Caulobacter crescentus oxidoreductase, short-chain dehydrogenase/reductase family cc3076 SWALL:Q9A3X5 (EMBL:AE005971) (254 aa) fasta scores: E(): 3.1e-29, 39.2% id in 250 aa.
 
  0.811
BPSL1424
Putative fatty acid degradation protein (possibly trifunctional); Similar to Ralstonia solanacearum probable trifunctional: enoyl-CoA hydratase and delta3-cis-delta2-trans-enoyl-CoA isomerase and 3-hydroxyacyl-CoA dehydrogenase oxidoreductase protein rsc1759 or rs02946 SWALL:Q8XYJ9 (EMBL:AL646066) (706 aa) fasta scores: E(): 2.4e-192, 74.6% id in 693 aa, and to Escherichia coli fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase] FadB or OldB or b3846 SWALL [...]
 
 0.800
BPSL0419
Similar to Cavia porcellus peroxisomal bifunctional enzyme [includes: enoyl-CoA hydratase; 3,2-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase] EHHADH SWALL:ECHP_CAVPO (SWALL:P55100) (725 aa) fasta scores: E(): 2.1e-66, 40.82% id in 703 aa, and to Rhizobium loti enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase mll4199 SWALL:Q98EK7 (EMBL:AP003003) (689 aa) fasta scores: E(): 1.1e-111, 50.14% id in 698 aa.
 
 0.779
BPSL0063
Similar to Pseudomonas fragi fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3- hydroxybutyryl-CoA epimerase] FaoA SWALL:FAOB_PSEFR (SWALL:P28793) (715 aa) fasta scores: E(): 5e-65, 36.06% id in 721 aa, and to Caulobacter crescentus fatty oxidation complex, alpha subunit CC0076 SWALL:Q9ABZ4 (EMBL:AE005681) (709 aa) fasta scores: E(): 8.9e-130, 55.26% id in 684 aa.
 
 0.777
BPSL0391
enoyl-CoA hydratase/isomerase family protein; Similar to Escherichia coli probable enoyl-CoA hydratase PaaG SWALL:PAAG_ECOLI (SWALL:P77467) (262 aa) fasta scores: E(): 1e-14, 30.8% id in 237 aa, and to Ralstonia solanacearum probable enoyl-CoA hydratase protein rsc0304 or rs03271 SWALL:Q8Y2N1 (EMBL:AL646058) (272 aa) fasta scores: E(): 2e-75, 74.26% id in 272 aa; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.745
BPSL1237
Similar to Escherichia coli probable enoyl-CoA hydratase PaaG or b1394 SWALL:PAAG_ECOLI (SWALL:P77467) (262 aa) fasta scores: E(): 1.9e-25, 37.75% id in 249 aa, and to Ralstonia solanacearum putative enoyl-CoA hydratase protein rsc2014 or rs03582 SWALL:Q8XXU9 (EMBL:AL646067) (259 aa) fasta scores: E(): 1.4e-55, 61.06% id in 262 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.745
BPSS0621
enoyl-CoA hydratase/isomerase family protein; Similar to Escherichia coli probable enoyl-CoA hydratase PaaF SWALL:PAAF_ECOLI (SWALL:P76082) (255 aa) fasta scores: E(): 3.9e-22, 37.59% id in 258 aa, and to Ralstonia solanacearum probable enoyl-CoA hydratase protein rsp0648 or rs05574 SWALL:Q8XS33 (EMBL:AL646080) (266 aa) fasta scores: E(): 1.9e-66, 70.42% id in 257 aa; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.745
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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