STRINGSTRING
BPSS1861 BPSS1861 BPSS0358 BPSS0358 BPSS1999 BPSS1999 BPSL2413 BPSL2413 BPSS0359 BPSS0359 BPSL0931 BPSL0931 BPSS0458 BPSS0458 pheA pheA tatB tatB tatA tatA tatC tatC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS1861Similar to Pseudomonas aeruginosa hypothetical protein pa2765 SWALL:Q9I078 (EMBL:AE004704) (299 aa) fasta scores: E(): 4.7e-77, 64.84% id in 293 aa, and to Escherichia coli hypothetical protein YfeX or b2431 SWALL:YFEX_ECOLI (SWALL:P76536) (299 aa) fasta scores: E(): 7.6e-18, 31.12% id in 257 aa. (293 aa)    
Predicted Functional Partners:
BPSS0358
Putative exported protein; Similar to Brucella melitensis hypothetical protein bmeii0884 SWALL:Q8YBL5 (EMBL:AE009722) (124 aa) fasta scores: E(): 2.2e-13, 46.29% id in 108 aa, and to Rickettsia conorii hypothetical protein rc0541 SWALL:Q92I79 (EMBL:AE008615) (126 aa) fasta scores: E(): 2.7e-07, 38.27% id in 81 aa.
  
  
 0.927
BPSS1999
Putative transport related, membrane protein; Similar to Rickettsia prowazekii hypothetical protein rp393 SWALL:Q9ZDD8 (EMBL:AJ235271) (282 aa) fasta scores: E(): 2.1e-27, 34.1% id in 258 aa, and to Brucella melitensis high-affinity iron permease bmeii0883 SWALL:Q8YBL6 (EMBL:AE009722) (278 aa) fasta scores: E(): 2.9e-16, 30.03% id in 273 aa.
 
  
 0.737
BPSL2413
Putative exported protein; Similar to Vibrio cholerae hypothetical protein vca0037 SWALL:Q9KNC8 (EMBL:AE004347) (150 aa) fasta scores: E(): 1.8e-06, 29.85% id in 134 aa, and to Caulobacter crescentus hypothetical protein cc3502 SWALL:Q9A2Q4 (EMBL:AE006008) (151 aa) fasta scores: E(): 1.8e-06, 31.94% id in 144 aa.
  
  
 0.710
BPSS0359
Putative membrane protein; Similar to Escherichia coli hypothetical protein YcdN or b1016/b1017 SWALL:YCDN_ECOLI (SWALL:P75901) (276 aa) fasta scores: E(): 5e-17, 30.28% id in 284 aa, and to Brucella melitensis high-affinity iron permease bmeii0883 SWALL:Q8YBL6 (EMBL:AE009722) (278 aa) fasta scores: E(): 6.8e-49, 53.58% id in 265 aa.
  
  
 0.701
BPSL0931
Similar to Escherichia coli copper resistance protein C precursor PcoC SWALL:PCOC_ECOLI (SWALL:Q47454) (126 aa) fasta scores: E(): 1.7e-07, 35.15% id in 128 aa, and to Salmonella typhimurium putative homolog of Cu resistance protein CopC yobA or stm1875 SWALL:Q8ZNX1 (EMBL:AE008783) (124 aa) fasta scores: E(): 8.2e-10, 37.09% id in 124 aa.
  
  
 0.650
BPSS0458
Similar to Yersinia pestis putative copper resistance protein ypo1784 SWALL:Q8ZFD0 (EMBL:AJ414150) (128 aa) fasta scores: E(): 5e-10, 40.51% id in 116 aa, and to Escherichia coli copper resistance protein C precursor PcoC SWALL:PCOC_ECOLI (SWALL:Q47454) (126 aa) fasta scores: E(): 6.1e-05, 34.86% id in 109 aa.
  
  
 0.650
pheA
Similar to many involved in Phenylalanine biosynthesis: Neisseria gonorrhoeae P-protein [includes: chorismate mutase (EC 5.4.99.5) (cm); prephenate dehydratase (EC 4.2.1.51) (pdt)] PheA SWALL:PHEA_NEIGO (SWALL:Q9ZHY3) (362 aa) fasta scores: E(): 1.8e-64, 50% id in 362 aa, Ralstonia solanacearum probable bifunctional protein: chorismate mutase and prephenate dehydratase PheA or rsc0904 or rs04511 SWALL:Q8Y0Y9 (EMBL:AL646061) (371 aa) fasta scores: E(): 9.6e-85, 61.45% id in 358 aa and to Pseudomonas stutzeri p-protein PheA SWALL:PHEA_PSEST (SWALL:P27603) (365 aa) fasta scores: E(): 3.4e [...]
     
 0.481
tatB
Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
  
  
 0.469
tatA
Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
  
 0.469
tatC
Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
  
  
 0.438
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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