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BPSS1862 BPSS1862 potG potG BPSS1197 BPSS1197 BPSS2259 BPSS2259 dnaK dnaK BPSL0655 BPSL0655 BPSL1712 BPSL1712 BPSS1285 BPSS1285 BPSL3093 BPSL3093 BPSS1008 BPSS1008 BPSL1664 BPSL1664
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
BPSS1862Similar to Rhizobium loti ATP-binding protein of ABC transporter mll0815 SWALL:Q98LY9 (EMBL:AP002995) (601 aa) fasta scores: E(): 1.6e-148, 71.28% id in 592 aa, and to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein Exsa or atu4728 or agr_l_309 SWALL:Q8U6S8 (EMBL:AE009401) (600 aa) fasta scores: E(): 1.8e-141, 68.41% id in 592 aa. (669 aa)    
Predicted Functional Partners:
potG
Putrescine transport ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
    
0.818
BPSS1197
Putative non-ribosomal peptide synthase; Similar to central portion of Ralstonia solanacearum probable peptide synthetase protein rsp0641 or rs05860 SWALL:Q8XS40 (EMBL:AL646079) (6889 aa) fasta scores: E(): 1.4e-124, 33.62% id in 3396 aa, and to N-terminus of Stigmatella aurantiaca StiC protein SWALL:Q8RJY4 (EMBL:AJ421825) (1885 aa) fasta scores: E(): 3.5e-95, 41.69% id in 933 aa, and to N-terminus of Stigmatella aurantiaca StiB protein SWALL:Q8RJY5 (EMBL:AJ421825) (1585 aa) fasta scores: E(): 1.3e-91, 36.35% id in 1268 aa.
  
 
 0.643
BPSS2259
Putative fusion protein, ATP-binding transmembrane ABC transporter and regulatory protein; No significant database matches to the full length CDS. N-terminal region is similar to Ralstonia solanacearum probable composite ATP-binding transmembrane ABC transporter protein rsc0478 or rs04417 SWALL:Q8Y258 (EMBL:AL646059) (592 aa) fasta scores: E(): 3.2e-84, 50.42% id in 591 aa, and to Yersinia pestis putative ABC transport protein ypo2588 SWALL:Q8ZDI0 (EMBL:AJ414152) (631 aa) fasta scores: E(): 6.9e-74, 47.04% id in 576 aa. C-terminal region is Similar to Ralstonia solanacearum probable co [...]
  
 
0.640
dnaK
Putative DnaK chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.626
BPSL0655
ATP-binding transmembrane ABC transporter protein; Similar to the C-terminal region of Homo sapiens ATP-binding cassette transporter 7, mitochondrial precursor ABCB7 or ABC7 SWALL:ABC7_HUMAN (SWALL:O75027) (752 aa) fasta scores: E(): 6.1e-95, 47.55% id in 614 aa, and to the full length Ralstonia solanacearum probable composite ATP-binding transmembrane ABC transporter protein rsc0478 or rs04417 SWALL:Q8Y258 (EMBL:AL646059) (592 aa) fasta scores: E(): 6.9e-141, 73.98% id in 592 aa. Similar to BPSS2259, 51.007% identity (53.427% ungapped) in 596 aa overlap. CDS is extended at the N-termi [...]
  
 
0.616
BPSL1712
Putative non-ribosomal antibiotic-related peptide synthase; Similar to Pseudomonas syringae syringomycin synthetase SyrE SWALL:O85168 (EMBL:AF047828) (9376 aa) fasta scores: E(): 1.5e-105, 31.93% id in 6198 aa, and to all the domains of Bacillus brevis tyrocidine synthetase III TycC SWALL:TYCC_BACBR (SWALL:O30409) blast scores: E(): 0.0, score: 4799 27% id. Note: Taking into consideration the blastp similarities and all the similarities to the domains in Bacillus brevis TycC, it could be proposed that BSPL1712 possibly incorporates six amino acids (Asn, Gln, Tyr, Val, Orn and Leu) into [...]
  
 
 0.607
BPSS1285
Family C39 unassigned peptidase; Similar to Klebsiella pneumoniae microcin MceG SWALL:Q93GK5 (EMBL:AF063590) (698 aa) fasta scores: E(): 2.3e-56, 29.89% id in 679 aa, and to Pseudomonas aeruginosa probable toxin transporter pa4143 SWALL:Q9HWN8 (EMBL:AE004831) (719 aa) fasta scores: E(): 1.8e-70, 33.9% id in 696 aa, and to Xylella fastidiosa colicin V secretion ABC transporter ATP-binding protein xf1220 SWALL:Q9PE08 (EMBL:AE003955) (707 aa) fasta scores: E(): 2.2e-67, 34% id in 700 aa.
 
 
 
0.598
BPSL3093
Colicin V processing peptidase; Similar to Pseudomonas aeruginosa probable toxin transporter Pa4143 SWALL:Q9HWN8 (EMBL:AE004831) (719 aa) fasta scores: E(): 1e-153, 67.77% id in 720 aa, and to Escherichia coli probable microcin H47 secretion ATP-binding protein MchF SWALL:MCHF_ECOLI (SWALL:Q9EXN5) (698 aa) fasta scores: E(): 2.1e-90, 41.15% id in 690 aa, and to Escherichia coli colicin V secretion ATP-binding protein CvaB SWALL:CVAB_ECOLI (SWALL:P22520) (698 aa) fasta scores: E(): 1.5e-87, 40.79% id in 679 aa.
 
 
 
0.585
BPSS1008
Putative polyketide synthase; N-terminal region is similar to the the N-terminal region of Bacillus subtilis putative polyketide synthase PksK SWALL:PKSK_BACSU (SWALL:P40803) (4447 aa) fasta scores: E(): 1.1e-167, 38.79% id in 3439 aa. Internal region is similar to an internal region of Pseudomonas fluorescens MmpIV protein SWALL:Q8RL72 (EMBL:AF318063) (6521 aa) fasta scores: E(): 2.8e-41, 32.83% id in 4069 aa.
  
 0.576
BPSL1664
Putative toxin transport-related membrane protein; Similar to the C-terminal region of Vibrio cholerae toxin secretion ATP-binding protein vca1084 SWALL:Q9KKL9 (EMBL:AE004433) (704 aa) fasta scores: E(): 1.4e-62, 34.99% id in 563 aa, and of Pasteurella haemolytica-like sp. leukotoxin secretion ATP-binding protein LktB SWALL:HLYB_PASSP (SWALL:P55122) (708 aa) fasta scores: E(): 5.3e-37, 27.82% id in 575 aa, and to the full length of Ralstonia solanacearum putative composite ATP-binding transmembrane ABC transporter protein rsp1182 or rs05072 SWALL:Q8XQP0 (EMBL:AL646083) (739 aa) fasta s [...]
   
 
0.551
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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