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BPSS2057 BPSS2057 ansA ansA BPSL3258 BPSL3258 BPSS1331 BPSS1331 BPSS0403 BPSS0403 BPSL0130 BPSL0130 BPSS0402 BPSS0402 BPSS2148 BPSS2148 BPSL3354 BPSL3354 BPSL0135 BPSL0135 BPSL0741 BPSL0741
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSS2057Putative IS element transposase; Similar to Burkholderia mallei transposase Tnp SWALL:Q9FDC1 (EMBL:AF285635) (386 aa) fasta scores: E(): 3.7e-163, 99.48% id in 386 aa, and to Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 2e-138, 78.32% id in 406 aa. (406 aa)    
Predicted Functional Partners:
ansA
L-asparaginase; Similar to Wolinella succinogenes L-asparaginase AnsA SWALL:ASPG_WOLSU (SWALL:P50286) (330 aa) fasta scores: E(): 1.2e-51, 48.32% id in 329 aa, and to Escherichia coli L-asparaginase II precursor AnsB or b2957 SWALL:ASG2_ECOLI (SWALL:P00805) (348 aa) fasta scores: E(): 1.5e-46, 47.23% id in 326 aa.
      
 0.580
BPSL3258
Similar to Campylobacter jejuni hypothetical protein RloE SWALL:Q8RN16 (EMBL:AF486555) (800 aa) fasta scores: E(): 3.7e-58, 34.92% id in 839 aa, and to Chlorobium tepidum hypothetical protein Ct0683 SWALL:AAM71921 (EMBL:AE012840) (767 aa) fasta scores: E(): 9e-12, 26.8% id in 802 aa. Contains PF02370 M protein repeats which are associated with virulence in group A Streptococci.
  
   
 0.499
BPSS1331
Putative phosphatase protein; Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc2492 or rs01104 SWALL:Q8XWI2 (EMBL:AL646070) (502 aa) fasta scores: E(): 6.5e-123, 66.4% id in 503 aa, and to Wolbachia sp. wri phosphoprotein phosphatase SWALL:Q9RBM2 (EMBL:AJ012073) (428 aa) fasta scores: E(): 9e-19, 28.91% id in 415 aa. Note: Also similar to BPSS0403 (479 aa) fasta scores: E(): 4.7e-135, 87.866% identity in 478 aa overlap.
  
     0.491
BPSS0403
Transposase (fragment); Probable gene remnant. Similar to the N-terminal regions of Ralstonia solanacearum ISRso16-transposase OrfA protein tisrso16A SWALL:Q8XSC1 (EMBL:AL646079) (88 aa) fasta scores: E(): 6.6e-08, 79.48% id in 39 aa, and to Xanthomonas campestris putative truncated transposase Tnp SWALL:Q8RJP9 (EMBL:U33548) (88 aa) fasta scores: E(): 9.8e-09, 75.61% id in 41 aa.
  
     0.479
BPSL0130
Conserved hypothetical phage protein; Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsc0967 or rs04399 SWALL:Q8Y0S6 (EMBL:AL646062) (933 aa) fasta scores: E(): 6.5e-153, 50.53% id in 930 aa. N-terminus is similar to the N-termial region of Anabaena sp. DNA primase ALL323 SWALL:Q8YX92 (EMBL:AP003585) (640 aa) fasta scores: E(): 0.21, 23.27% id in 391 aa.
  
   
 0.474
BPSS0402
Probable fusion protein. N-terminal region highly similar to Bacteriophage phiE125 Gp43 SWALL:Q8W6Q7 (EMBL:AF447491) (270 aa) fasta scores: E(): 5e-90, 99.61% id in 258 aa, and C-terminal region to Pseudomonas putida transposase, ORFB pp4420 SWALL:AAN69997 (EMBL:AE016790) (269 aa) fasta scores: E(): 1.3e-18, 48.07% id in 156 aa; N-terminal region highly similar to Bacteriophage phiE125 Gp43 SWALL:Q8W6Q7 (EMBL:AF447491) (270 aa) fasta scores: E(): 5e-90, 99.61% id in 258 aa, and C-terminal region to Pseudomonas putida transposase, ORFB pp4420 SWALL:AAN69997 (EMBL:AE016790) (269 aa) fast [...]
  
     0.461
BPSS2148
Conserved hypothetical protein (fragment); PF0872.
 
     0.434
BPSL3354
tRNA-Arg; tRNA Arg anticodon CCG, Cove score 82.41.
      
 0.402
BPSL0135
Similar to Ralstonia solanacearum hypothetical protein rsc1899 or rs03466 SWALL:Q8XY64 (EMBL:AL646067) (68 aa) fasta scores: E(): 2.2, 28.78% id in 66 aa.
      
 0.400
BPSL0741
Similar to Ralstonia solanacearum hypothetical protein rsc2611 or rs00860 SWALL:Q8XW64 (EMBL:AL646071) (187 aa) fasta scores: E(): 5.2e-12, 33.33% id in 183 aa, and to Anabaena sp. hypothetical protein all2200 SWALL:Q8YUY1 (EMBL:AP003588) (186 aa) fasta scores: E(): 8.2e-12, 32.54% id in 169 aa.
  
     0.400
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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