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potA potA potC potC potB potB DVU_0095 DVU_0095 DVU_0127 DVU_0127 modB modB DVU_2576 DVU_2576 DVU_2437 DVU_2437 DVU_1056 DVU_1056 glnP glnP DVU_0389 DVU_0389
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
potAPolyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (368 aa)    
Predicted Functional Partners:
potC
Polyamine ABC transporter, permease protein; Identified by similarity to SP:P23859; match to protein family HMM PF00528.
 
 0.999
potB
Polyamine ABC transporter, permease protein; Identified by similarity to SP:P23860; match to protein family HMM PF00528.
 0.998
DVU_0095
Polyamine ABC transporter, periplasmic polyamine-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.997
DVU_0127
Membrane protein, putative; Identified by similarity to SP:P75774.
 
 
 
  0.932
modB
Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.907
DVU_2576
Oligopeptide ABC transporter, ATP-binding protein; Identified by similarity to SP:P42064; match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
 
 
  
0.901
DVU_2437
ABC transporter, permease protein; Identified by similarity to OMNI:NTL01TE1382; match to protein family HMM PF02687.
 
 
    0.895
DVU_1056
Cobalt ABC transporter, ATP-binding protein, putative; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
 
   
0.784
glnP
Glutamine ABC transporter, permease protein; Identified by similarity to SP:P10345; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
 
 0.734
DVU_0389
Amino acid ABC tranporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
 
 0.719
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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