Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DVU_0145 | DVU_0146 | Response regulator; Identified by match to protein family HMM PF00072. | Hypothetical protein; Identified by Glimmer2; putative. | 0.800 |
DVU_0145 | DVU_0147 | Response regulator; Identified by match to protein family HMM PF00072. | Lipoprotein, putative. | 0.569 |
DVU_0145 | DVU_0148 | Response regulator; Identified by match to protein family HMM PF00072. | Lipoprotein, putative. | 0.936 |
DVU_0145 | DVU_0149 | Response regulator; Identified by match to protein family HMM PF00072. | Membrane protein, putative; Identified by similarity to OMNI:NTL01HSA00048; match to protein family HMM PF01925. | 0.792 |
DVU_0145 | DVU_0150 | Response regulator; Identified by match to protein family HMM PF00072. | Membrane protein, putative. | 0.786 |
DVU_0146 | DVU_0145 | Hypothetical protein; Identified by Glimmer2; putative. | Response regulator; Identified by match to protein family HMM PF00072. | 0.800 |
DVU_0146 | DVU_0147 | Hypothetical protein; Identified by Glimmer2; putative. | Lipoprotein, putative. | 0.845 |
DVU_0146 | DVU_0148 | Hypothetical protein; Identified by Glimmer2; putative. | Lipoprotein, putative. | 0.884 |
DVU_0146 | DVU_0149 | Hypothetical protein; Identified by Glimmer2; putative. | Membrane protein, putative; Identified by similarity to OMNI:NTL01HSA00048; match to protein family HMM PF01925. | 0.946 |
DVU_0146 | DVU_0150 | Hypothetical protein; Identified by Glimmer2; putative. | Membrane protein, putative. | 0.851 |
DVU_0147 | DVU_0145 | Lipoprotein, putative. | Response regulator; Identified by match to protein family HMM PF00072. | 0.569 |
DVU_0147 | DVU_0146 | Lipoprotein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.845 |
DVU_0147 | DVU_0148 | Lipoprotein, putative. | Lipoprotein, putative. | 0.807 |
DVU_0147 | DVU_0149 | Lipoprotein, putative. | Membrane protein, putative; Identified by similarity to OMNI:NTL01HSA00048; match to protein family HMM PF01925. | 0.890 |
DVU_0147 | DVU_0150 | Lipoprotein, putative. | Membrane protein, putative. | 0.795 |
DVU_0148 | DVU_0145 | Lipoprotein, putative. | Response regulator; Identified by match to protein family HMM PF00072. | 0.936 |
DVU_0148 | DVU_0146 | Lipoprotein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.884 |
DVU_0148 | DVU_0147 | Lipoprotein, putative. | Lipoprotein, putative. | 0.807 |
DVU_0148 | DVU_0149 | Lipoprotein, putative. | Membrane protein, putative; Identified by similarity to OMNI:NTL01HSA00048; match to protein family HMM PF01925. | 0.981 |
DVU_0148 | DVU_0150 | Lipoprotein, putative. | Membrane protein, putative. | 0.955 |
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