node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DVU_0155 | DVU_0156 | DVU_0155 | DVU_0156 | Identified by match to protein family HMM PF01663. | ATP-dependent DNA helicase, UvrD/REP family; Identified by match to protein family HMM PF00580. | 0.801 |
DVU_0155 | DVU_0158 | DVU_0155 | DVU_0158 | Identified by match to protein family HMM PF01663. | Conserved hypothetical protein TIGR00104; Identified by match to protein family HMM PF00596; match to protein family HMM PF01980; match to protein family HMM TIGR00104. | 0.774 |
DVU_0155 | thiL | DVU_0155 | DVU_0157 | Identified by match to protein family HMM PF01663. | Thiamin-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.789 |
DVU_0156 | DVU_0155 | DVU_0156 | DVU_0155 | ATP-dependent DNA helicase, UvrD/REP family; Identified by match to protein family HMM PF00580. | Identified by match to protein family HMM PF01663. | 0.801 |
DVU_0156 | DVU_0158 | DVU_0156 | DVU_0158 | ATP-dependent DNA helicase, UvrD/REP family; Identified by match to protein family HMM PF00580. | Conserved hypothetical protein TIGR00104; Identified by match to protein family HMM PF00596; match to protein family HMM PF01980; match to protein family HMM TIGR00104. | 0.747 |
DVU_0156 | DVU_2427 | DVU_0156 | DVU_2427 | ATP-dependent DNA helicase, UvrD/REP family; Identified by match to protein family HMM PF00580. | Hypothetical protein; Identified by Glimmer2; putative. | 0.564 |
DVU_0156 | radA | DVU_0156 | DVU_1590 | ATP-dependent DNA helicase, UvrD/REP family; Identified by match to protein family HMM PF00580. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.685 |
DVU_0156 | thiL | DVU_0156 | DVU_0157 | ATP-dependent DNA helicase, UvrD/REP family; Identified by match to protein family HMM PF00580. | Thiamin-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.809 |
DVU_0158 | DVU_0155 | DVU_0158 | DVU_0155 | Conserved hypothetical protein TIGR00104; Identified by match to protein family HMM PF00596; match to protein family HMM PF01980; match to protein family HMM TIGR00104. | Identified by match to protein family HMM PF01663. | 0.774 |
DVU_0158 | DVU_0156 | DVU_0158 | DVU_0156 | Conserved hypothetical protein TIGR00104; Identified by match to protein family HMM PF00596; match to protein family HMM PF01980; match to protein family HMM TIGR00104. | ATP-dependent DNA helicase, UvrD/REP family; Identified by match to protein family HMM PF00580. | 0.747 |
DVU_0158 | thiL | DVU_0158 | DVU_0157 | Conserved hypothetical protein TIGR00104; Identified by match to protein family HMM PF00596; match to protein family HMM PF01980; match to protein family HMM TIGR00104. | Thiamin-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.843 |
DVU_2427 | DVU_0156 | DVU_2427 | DVU_0156 | Hypothetical protein; Identified by Glimmer2; putative. | ATP-dependent DNA helicase, UvrD/REP family; Identified by match to protein family HMM PF00580. | 0.564 |
DVU_2427 | thiL | DVU_2427 | DVU_0157 | Hypothetical protein; Identified by Glimmer2; putative. | Thiamin-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.705 |
adk | rsgA | DVU_1932 | DVU_2218 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | GTP-binding protein, putative; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.900 |
adk | thiL | DVU_1932 | DVU_0157 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Thiamin-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.901 |
radA | DVU_0156 | DVU_1590 | DVU_0156 | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | ATP-dependent DNA helicase, UvrD/REP family; Identified by match to protein family HMM PF00580. | 0.685 |
radA | thiL | DVU_1590 | DVU_0157 | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | Thiamin-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.701 |
ribD | thiE-1 | DVU_1201 | DVU_2091 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). | 0.488 |
ribD | thiE-2 | DVU_1201 | DVU_2362 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.488 |
ribD | thiL | DVU_1201 | DVU_0157 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Thiamin-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.726 |