Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| DVU_0172 | DVU_0173 | Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037. | Thiosulfate reductase, putative; Identified by similarity to SP:P37600; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879. | 0.985 |
| DVU_0172 | DVU_0174 | Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037. | Hypothetical protein; Identified by Glimmer2; putative. | 0.776 |
| DVU_0173 | DVU_0172 | Thiosulfate reductase, putative; Identified by similarity to SP:P37600; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879. | Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037. | 0.985 |
| DVU_0173 | DVU_0174 | Thiosulfate reductase, putative; Identified by similarity to SP:P37600; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879. | Hypothetical protein; Identified by Glimmer2; putative. | 0.778 |
| DVU_0174 | DVU_0172 | Hypothetical protein; Identified by Glimmer2; putative. | Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037. | 0.776 |
| DVU_0174 | DVU_0173 | Hypothetical protein; Identified by Glimmer2; putative. | Thiosulfate reductase, putative; Identified by similarity to SP:P37600; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879. | 0.778 |
| DVU_0174 | DVU_0729 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.544 |
| DVU_0729 | DVU_0174 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.544 |