Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DVU_0199 | DVU_0200 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS0859. | Major head protein; Identified by match to protein family HMM PF03864. | 0.918 |
DVU_0199 | DVU_0201 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS0859. | Hypothetical protein; Identified by Glimmer2; putative. | 0.896 |
DVU_0199 | DVU_0202 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS0859. | Holin; Identified by match to protein family HMM TIGR01593. | 0.774 |
DVU_0199 | DVU_0203 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS0859. | Conserved hypothetical protein; Identified by match to protein family HMM PF05838. | 0.774 |
DVU_0199 | DVU_0204 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS0859. | Lipoprotein, putative. | 0.805 |
DVU_0199 | DVU_0205 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS0859. | Hypothetical protein; Identified by Glimmer2; putative. | 0.797 |
DVU_0199 | DVU_0206 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS0859. | Hypothetical protein; Identified by Glimmer2; putative. | 0.716 |
DVU_0199 | DVU_0207 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS0859. | Hypothetical protein; Identified by Glimmer2; putative. | 0.698 |
DVU_0199 | DVU_0208 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS0859. | Hypothetical protein; Identified by Glimmer2; putative. | 0.903 |
DVU_0199 | DVU_0209 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS0859. | Conserved hypothetical protein; Identified by similarity to GP:1834290. | 0.729 |
DVU_0200 | DVU_0199 | Major head protein; Identified by match to protein family HMM PF03864. | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS0859. | 0.918 |
DVU_0200 | DVU_0201 | Major head protein; Identified by match to protein family HMM PF03864. | Hypothetical protein; Identified by Glimmer2; putative. | 0.962 |
DVU_0200 | DVU_0202 | Major head protein; Identified by match to protein family HMM PF03864. | Holin; Identified by match to protein family HMM TIGR01593. | 0.840 |
DVU_0200 | DVU_0203 | Major head protein; Identified by match to protein family HMM PF03864. | Conserved hypothetical protein; Identified by match to protein family HMM PF05838. | 0.846 |
DVU_0200 | DVU_0204 | Major head protein; Identified by match to protein family HMM PF03864. | Lipoprotein, putative. | 0.910 |
DVU_0200 | DVU_0205 | Major head protein; Identified by match to protein family HMM PF03864. | Hypothetical protein; Identified by Glimmer2; putative. | 0.929 |
DVU_0200 | DVU_0206 | Major head protein; Identified by match to protein family HMM PF03864. | Hypothetical protein; Identified by Glimmer2; putative. | 0.839 |
DVU_0200 | DVU_0207 | Major head protein; Identified by match to protein family HMM PF03864. | Hypothetical protein; Identified by Glimmer2; putative. | 0.728 |
DVU_0200 | DVU_0208 | Major head protein; Identified by match to protein family HMM PF03864. | Hypothetical protein; Identified by Glimmer2; putative. | 0.740 |
DVU_0200 | DVU_0209 | Major head protein; Identified by match to protein family HMM PF03864. | Conserved hypothetical protein; Identified by similarity to GP:1834290. | 0.742 |
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