STRINGSTRING
DVU_0211 DVU_0211 DVU_0209 DVU_0209 DVU_0210 DVU_0210 DVU_0208 DVU_0208 DVU_0204 DVU_0204 DVU_0205 DVU_0205 DVU_0212 DVU_0212 DVU_2859 DVU_2859 DVU_0207 DVU_0207 DVU_0206 DVU_0206 DVU_0201 DVU_0201
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0211Tail tube protein, putative; Identified by similarity to SP:P79679. (121 aa)    
Predicted Functional Partners:
DVU_0209
Conserved hypothetical protein; Identified by similarity to GP:1834290.
  
    0.932
DVU_0210
Tail sheath protein, putative; Identified by similarity to SP:P79678.
  
  
 0.898
DVU_0208
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.894
DVU_0204
Lipoprotein, putative.
  
    0.888
DVU_0205
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.886
DVU_0212
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03ST4078.
  
    0.872
DVU_2859
Tail sheath protein, putative; Identified by similarity to SP:P79678.
  
  
 0.856
DVU_0207
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.848
DVU_0206
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.832
DVU_0201
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.678
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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