STRINGSTRING
DVU_0212 DVU_0212 DVU_0209 DVU_0209 DVU_0210 DVU_0210 DVU_0207 DVU_0207 DVU_0211 DVU_0211 DVU_0206 DVU_0206 DVU_2859 DVU_2859 DVU_2850 DVU_2850 DVU_0205 DVU_0205 DVU_0219 DVU_0219 DVU_0208 DVU_0208
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0212Conserved hypothetical protein; Identified by similarity to OMNI:NTL03ST4078. (86 aa)    
Predicted Functional Partners:
DVU_0209
Conserved hypothetical protein; Identified by similarity to GP:1834290.
  
    0.907
DVU_0210
Tail sheath protein, putative; Identified by similarity to SP:P79678.
  
    0.886
DVU_0207
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.873
DVU_0211
Tail tube protein, putative; Identified by similarity to SP:P79679.
  
    0.872
DVU_0206
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.848
DVU_2859
Tail sheath protein, putative; Identified by similarity to SP:P79678.
   
    0.734
DVU_2850
Tail protein, putative; Identified by similarity to GP:19483737.
   
    0.723
DVU_0205
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.717
DVU_0219
Tail protein, putative; Identified by similarity to GP:19483737.
  
    0.708
DVU_0208
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.684
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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