Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DVU_0257 | DVU_0864 | DVU_0257 | DVU_0864 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Glycoprotease family protein, putative; Identified by match to protein family HMM PF00814. | 0.519 |
DVU_0257 | DVU_2217 | DVU_0257 | DVU_2217 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Acetyltransferase, GNAT family; Identified by similarity to SP:P45473; match to protein family HMM PF00583. | 0.494 |
DVU_0257 | DVU_2225 | DVU_0257 | DVU_2225 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | acetyl-CoA carboxylase, carboxyl transferase, alpha/beta subunit. | 0.471 |
DVU_0257 | guaA | DVU_0257 | DVU_1043 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.534 |
DVU_0257 | lipB | DVU_0257 | DVU_0906 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.836 |
DVU_0864 | DVU_0257 | DVU_0864 | DVU_0257 | Glycoprotease family protein, putative; Identified by match to protein family HMM PF00814. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.519 |
DVU_0864 | guaA | DVU_0864 | DVU_1043 | Glycoprotease family protein, putative; Identified by match to protein family HMM PF00814. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.490 |
DVU_2217 | DVU_0257 | DVU_2217 | DVU_0257 | Acetyltransferase, GNAT family; Identified by similarity to SP:P45473; match to protein family HMM PF00583. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.494 |
DVU_2225 | DVU_0257 | DVU_2225 | DVU_0257 | acetyl-CoA carboxylase, carboxyl transferase, alpha/beta subunit. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.471 |
DVU_2225 | guaA | DVU_2225 | DVU_1043 | acetyl-CoA carboxylase, carboxyl transferase, alpha/beta subunit. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.626 |
guaA | DVU_0257 | DVU_1043 | DVU_0257 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.534 |
guaA | DVU_0864 | DVU_1043 | DVU_0864 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Glycoprotease family protein, putative; Identified by match to protein family HMM PF00814. | 0.490 |
guaA | DVU_2225 | DVU_1043 | DVU_2225 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | acetyl-CoA carboxylase, carboxyl transferase, alpha/beta subunit. | 0.626 |
lipB | DVU_0257 | DVU_0906 | DVU_0257 | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.836 |