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DVU_0259 DVU_0259 DVU_0260 DVU_0260 DVU_0263 DVU_0263 DVU_0270 DVU_0270 DVU_0261 DVU_0261 DVU_0271 DVU_0271 DVU_0449 DVU_0449 DVU_0266 DVU_0266 DVU_0265 DVU_0265 DVU_0581 DVU_0581 DVU_2966 DVU_2966
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_0259DNA-binding response regulator; Identified by similarity to SP:P33394; match to protein family HMM PF00072. (129 aa)    
Predicted Functional Partners:
DVU_0260
Response regulator; Identified by match to protein family HMM PF00072.
  
0.912
DVU_0263
Acidic cytochrome c3; Identified by similarity to SP:P94690.
 
    0.842
DVU_0270
Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
 
 
 0.833
DVU_0261
Identified by match to protein family HMM PF00582.
 
    0.832
DVU_0271
Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF02518.
 
   0.814
DVU_0449
Sensor/response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.769
DVU_0266
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.749
DVU_0265
Membrane protein, putative.
 
    0.746
DVU_0581
Response regulator/anti-anti-sigma factor; Identified by match to protein family HMM PF00072.
  
     0.740
DVU_2966
Response regulator; Identified by match to protein family HMM PF00072.
  
    0.725
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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