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DVU_0266 DVU_0266 DVU_0264 DVU_0264 DVU_0265 DVU_0265 DVU_0263 DVU_0263 DVU_0261 DVU_0261 DVU_0258 DVU_0258 cpoB-2 cpoB-2 DVU_1422 DVU_1422 DVU_0270 DVU_0270 DVU_0267 DVU_0267 DVU_0532 DVU_0532
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_0266Hypothetical protein; Identified by Glimmer2; putative. (408 aa)    
Predicted Functional Partners:
DVU_0264
Ferredoxin, 4Fe-4S, putative; Identified by similarity to SP:P33393; match to protein family HMM PF00037; match to protein family HMM PF02754.
 
 
 0.996
DVU_0265
Membrane protein, putative.
 
    0.992
DVU_0263
Acidic cytochrome c3; Identified by similarity to SP:P94690.
 
  
 0.943
DVU_0261
Identified by match to protein family HMM PF00582.
 
  
 0.846
DVU_0258
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
 
   
 0.830
cpoB-2
TPR domain protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
  
  
 0.827
DVU_1422
Identified by match to protein family HMM PF00691.
  
 
 0.822
DVU_0270
Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
 
    0.785
DVU_0267
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.782
DVU_0532
Hmc operon protein 5; HMWC (high-molecular-weight cytochrome c), ORF2, ORF3, ORF4, ORF5 and ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfates.
  
     0.765
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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