Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DVU_0117 | DVU_0275 | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Identified by match to protein family HMM PF01522. | 0.659 |
DVU_0274 | DVU_0275 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF01522. | 0.411 |
DVU_0275 | DVU_0117 | Identified by match to protein family HMM PF01522. | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.659 |
DVU_0275 | DVU_0274 | Identified by match to protein family HMM PF01522. | Hypothetical protein; Identified by Glimmer2; putative. | 0.411 |
DVU_0275 | DVU_0635 | Identified by match to protein family HMM PF01522. | Identified by match to protein family HMM PF02366. | 0.438 |
DVU_0275 | DVU_0786 | Identified by match to protein family HMM PF01522. | Penicillin-binding protein; Identified by similarity to SP:P08150; match to protein family HMM PF00905; match to protein family HMM PF03717. | 0.439 |
DVU_0275 | DVU_1214 | Identified by match to protein family HMM PF01522. | Identified by match to protein family HMM PF02366. | 0.429 |
DVU_0275 | DVU_1892 | Identified by match to protein family HMM PF01522. | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.665 |
DVU_0635 | DVU_0275 | Identified by match to protein family HMM PF02366. | Identified by match to protein family HMM PF01522. | 0.438 |
DVU_0786 | DVU_0275 | Penicillin-binding protein; Identified by similarity to SP:P08150; match to protein family HMM PF00905; match to protein family HMM PF03717. | Identified by match to protein family HMM PF01522. | 0.439 |
DVU_1214 | DVU_0275 | Identified by match to protein family HMM PF02366. | Identified by match to protein family HMM PF01522. | 0.429 |
DVU_1892 | DVU_0275 | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Identified by match to protein family HMM PF01522. | 0.665 |