Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DVU_0290 | DVU_0291 | DVU_0290 | DVU_0291 | Lipoprotein, putative. | ABC transporter, ATP-binding protein; Identified by similarity to SP:P16676; match to protein family HMM PF00005. | 0.703 |
DVU_0290 | DVU_0292 | DVU_0290 | DVU_0292 | Lipoprotein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.706 |
DVU_0290 | moaC | DVU_0290 | DVU_0289 | Lipoprotein, putative. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.603 |
DVU_0291 | DVU_0290 | DVU_0291 | DVU_0290 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P16676; match to protein family HMM PF00005. | Lipoprotein, putative. | 0.703 |
DVU_0291 | DVU_0292 | DVU_0291 | DVU_0292 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P16676; match to protein family HMM PF00005. | Hypothetical protein; Identified by Glimmer2; putative. | 0.832 |
DVU_0291 | moaC | DVU_0291 | DVU_0289 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P16676; match to protein family HMM PF00005. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.483 |
DVU_0292 | DVU_0290 | DVU_0292 | DVU_0290 | Hypothetical protein; Identified by Glimmer2; putative. | Lipoprotein, putative. | 0.706 |
DVU_0292 | DVU_0291 | DVU_0292 | DVU_0291 | Hypothetical protein; Identified by Glimmer2; putative. | ABC transporter, ATP-binding protein; Identified by similarity to SP:P16676; match to protein family HMM PF00005. | 0.832 |
DVU_0292 | moaC | DVU_0292 | DVU_0289 | Hypothetical protein; Identified by Glimmer2; putative. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.453 |
moaC | DVU_0290 | DVU_0289 | DVU_0290 | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | Lipoprotein, putative. | 0.603 |
moaC | DVU_0291 | DVU_0289 | DVU_0291 | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | ABC transporter, ATP-binding protein; Identified by similarity to SP:P16676; match to protein family HMM PF00005. | 0.483 |
moaC | DVU_0292 | DVU_0289 | DVU_0292 | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.453 |