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DVU_0343 DVU_0343 DVU_0342 DVU_0342 DVU_0341 DVU_0341 DVU_0338 DVU_0338 DVU_0875 DVU_0875 DVU_0339 DVU_0339 DVU_0340 DVU_0340 DVU_0173 DVU_0173 nnrD nnrD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
DVU_0343Identified by similarity to SP:P23522; match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. (260 aa)    
Predicted Functional Partners:
DVU_0342
Identified by match to protein family HMM PF01370.
 
    0.912
DVU_0341
3-deoxy-D-manno-octulosonate cytidylyltransferase; Identified by similarity to SP:P42216; match to protein family HMM PF02348.
    0.705
DVU_0338
Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702.
 
    0.673
DVU_0875
Identified by match to protein family HMM PF01557.
  
  
 0.567
DVU_0339
D-isomer specific 2-hydroxyacid dehydrogenase family protein; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
    0.559
DVU_0340
Acetyltransferase, CysE/LacA/LpxA/NodL family; Identified by similarity to SP:P26839; match to protein family HMM PF00132.
 
  
 0.532
DVU_0173
Thiosulfate reductase, putative; Identified by similarity to SP:P37600; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879.
  
   0.520
nnrD
YjeF-related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]
  
  
 0.493
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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