STRINGSTRING
DVU_0378 DVU_0378 trxB-1 trxB-1 DVU_1457 DVU_1457 arsC arsC DVU_0379 DVU_0379 DVU_0283 DVU_0283 trxB-2 trxB-2 DVU_0376 DVU_0376 DVU_0375 DVU_0375 DVU_1368 DVU_1368 groEL groEL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
DVU_0378Thioredoxin, putative; Identified by similarity to SP:P80579. (104 aa)    
Predicted Functional Partners:
trxB-1
Thioredoxin reductase; Identified by similarity to SP:P50971; match to protein family HMM PF00070.
  
 
 0.969
DVU_1457
Thioredoxin reductase, putative; Identified by similarity to SP:Q05741; match to protein family HMM PF00070.
  
 
 0.890
arsC
Arsenate reductase; Identified by similarity to SP:P45947; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.791
DVU_0379
Transcriptional regulator, putative; Identified by match to protein family HMM PF00027.
  
  
 0.737
DVU_0283
AhpF family protein/thioredoxin reductase; Identified by similarity to SP:P80880; match to protein family HMM PF00070; match to protein family HMM TIGR01292.
  
 
 0.734
trxB-2
Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM TIGR01292.
  
 
 0.734
DVU_0376
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.732
DVU_0375
Identified by match to protein family HMM PF00208.
  
  
 0.723
DVU_1368
Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.
  
 
 0.717
groEL
Chaperonin, 60 kDa; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.687
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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