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nhaC-1 nhaC-1 DVU_2645 DVU_2645 DVU_0380 DVU_0380 DVU_0375 DVU_0375 DVU_0382 DVU_0382 DVU_0378 DVU_0378 DVU_0379 DVU_0379 DVU_1082 DVU_1082 putA putA DVU_0392 DVU_0392 aspB aspB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
nhaC-1Na+/H+ antiporter NhaC; Identified by similarity to SP:P27611; match to protein family HMM PF03553; match to protein family HMM TIGR00931. (463 aa)    
Predicted Functional Partners:
DVU_2645
Na+/H+ antiporter family protein; Identified by similarity to SP:P27611.
  
    0.638
DVU_0380
Sulfatase, putative; Identified by match to protein family HMM PF00884.
  
    0.634
DVU_0375
Identified by match to protein family HMM PF00208.
 
    0.565
DVU_0382
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.558
DVU_0378
Thioredoxin, putative; Identified by similarity to SP:P80579.
  
 
 0.546
DVU_0379
Transcriptional regulator, putative; Identified by match to protein family HMM PF00027.
  
    0.528
DVU_1082
3'- 5' exonuclease domain protein; Identified by match to protein family HMM PF01612.
   
 0.517
putA
Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
  
  
 0.511
DVU_0392
Aromatic aminotransferase; Identified by similarity to GP:14278621; match to protein family HMM PF00155.
   
  
 0.483
aspB
Aspartate aminotransferase; Identified by similarity to SP:P23034; match to protein family HMM PF00155.
   
  
 0.483
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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