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DVU_0444 DVU_0444 DVU_0443 DVU_0443 DVU_0446 DVU_0446 DVU_0445 DVU_0445 DVU_0447 DVU_0447 guaA guaA DVU_0442 DVU_0442
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0444CBS domain protein; Identified by match to protein family HMM PF00571. (740 aa)    
Predicted Functional Partners:
DVU_0443
Exonulcease, putative; Identified by match to protein family HMM PF00929.
 
    0.940
DVU_0446
Identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.886
DVU_0445
CBS domain protein; Identified by match to protein family HMM PF00571.
 
   
0.856
DVU_0447
Membrane protein, putative; Identified by similarity to SP:P32706; match to protein family HMM PF04341.
  
  
 0.823
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.535
DVU_0442
Identified by match to protein family HMM PF02562.
  
    0.472
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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