Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0465 | pabA | DVU_0465 | DVU_0364 | Anthranilate synthase, component I; Identified by similarity to SP:O66849; match to protein family HMM PF00425; match to protein family HMM PF04715. | Para-aminobenzoate/anthranilate synthase glutamine amidotransferase; Identified by similarity to SP:P28819; match to protein family HMM PF00117. | 0.999 |
| DVU_0465 | pabB | DVU_0465 | DVU_0363 | Anthranilate synthase, component I; Identified by similarity to SP:O66849; match to protein family HMM PF00425; match to protein family HMM PF04715. | Para-aminobenzoate synthase, component I; Identified by match to protein family HMM PF00425. | 0.848 |
| DVU_0465 | trpA | DVU_0465 | DVU_0471 | Anthranilate synthase, component I; Identified by similarity to SP:O66849; match to protein family HMM PF00425; match to protein family HMM PF04715. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. | 0.991 |
| DVU_0465 | trpB-1 | DVU_0465 | DVU_0085 | Anthranilate synthase, component I; Identified by similarity to SP:O66849; match to protein family HMM PF00425; match to protein family HMM PF04715. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.911 |
| DVU_0465 | trpB-2 | DVU_0465 | DVU_0470 | Anthranilate synthase, component I; Identified by similarity to SP:O66849; match to protein family HMM PF00425; match to protein family HMM PF04715. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine; Belongs to the TrpB family. | 0.969 |
| DVU_0465 | trpC | DVU_0465 | DVU_0468 | Anthranilate synthase, component I; Identified by similarity to SP:O66849; match to protein family HMM PF00425; match to protein family HMM PF04715. | Indole-3-glycerol phosphate synthase; Identified by match to protein family HMM PF00218. | 0.999 |
| DVU_0465 | trpD | DVU_0465 | DVU_0467 | Anthranilate synthase, component I; Identified by similarity to SP:O66849; match to protein family HMM PF00425; match to protein family HMM PF04715. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.999 |
| DVU_0465 | trpF-1 | DVU_0465 | DVU_0469 | Anthranilate synthase, component I; Identified by similarity to SP:O66849; match to protein family HMM PF00425; match to protein family HMM PF04715. | N-(5'-phosphoribosyl)anthranilate isomerase; Identified by match to protein family HMM PF00697; Belongs to the TrpF family. | 0.972 |
| DVU_0465 | trpF-2 | DVU_0465 | DVU_2492 | Anthranilate synthase, component I; Identified by similarity to SP:O66849; match to protein family HMM PF00425; match to protein family HMM PF04715. | N-(5'-phosphoribosyl)anthranilate isomerase; Identified by match to protein family HMM PF00697; Belongs to the TrpF family. | 0.822 |
| DVU_0465 | trpG | DVU_0465 | DVU_0466 | Anthranilate synthase, component I; Identified by similarity to SP:O66849; match to protein family HMM PF00425; match to protein family HMM PF04715. | Anthranilate synthase, glutamine amidotransferase component; Identified by similarity to SP:Q08654; match to protein family HMM PF00117; match to protein family HMM TIGR00566. | 0.999 |
| pabA | DVU_0465 | DVU_0364 | DVU_0465 | Para-aminobenzoate/anthranilate synthase glutamine amidotransferase; Identified by similarity to SP:P28819; match to protein family HMM PF00117. | Anthranilate synthase, component I; Identified by similarity to SP:O66849; match to protein family HMM PF00425; match to protein family HMM PF04715. | 0.999 |
| pabA | pabB | DVU_0364 | DVU_0363 | Para-aminobenzoate/anthranilate synthase glutamine amidotransferase; Identified by similarity to SP:P28819; match to protein family HMM PF00117. | Para-aminobenzoate synthase, component I; Identified by match to protein family HMM PF00425. | 0.999 |
| pabA | trpA | DVU_0364 | DVU_0471 | Para-aminobenzoate/anthranilate synthase glutamine amidotransferase; Identified by similarity to SP:P28819; match to protein family HMM PF00117. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. | 0.946 |
| pabA | trpB-1 | DVU_0364 | DVU_0085 | Para-aminobenzoate/anthranilate synthase glutamine amidotransferase; Identified by similarity to SP:P28819; match to protein family HMM PF00117. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.831 |
| pabA | trpB-2 | DVU_0364 | DVU_0470 | Para-aminobenzoate/anthranilate synthase glutamine amidotransferase; Identified by similarity to SP:P28819; match to protein family HMM PF00117. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine; Belongs to the TrpB family. | 0.844 |
| pabA | trpC | DVU_0364 | DVU_0468 | Para-aminobenzoate/anthranilate synthase glutamine amidotransferase; Identified by similarity to SP:P28819; match to protein family HMM PF00117. | Indole-3-glycerol phosphate synthase; Identified by match to protein family HMM PF00218. | 0.995 |
| pabA | trpD | DVU_0364 | DVU_0467 | Para-aminobenzoate/anthranilate synthase glutamine amidotransferase; Identified by similarity to SP:P28819; match to protein family HMM PF00117. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.996 |
| pabA | trpF-1 | DVU_0364 | DVU_0469 | Para-aminobenzoate/anthranilate synthase glutamine amidotransferase; Identified by similarity to SP:P28819; match to protein family HMM PF00117. | N-(5'-phosphoribosyl)anthranilate isomerase; Identified by match to protein family HMM PF00697; Belongs to the TrpF family. | 0.914 |
| pabA | trpF-2 | DVU_0364 | DVU_2492 | Para-aminobenzoate/anthranilate synthase glutamine amidotransferase; Identified by similarity to SP:P28819; match to protein family HMM PF00117. | N-(5'-phosphoribosyl)anthranilate isomerase; Identified by match to protein family HMM PF00697; Belongs to the TrpF family. | 0.816 |
| pabA | trpG | DVU_0364 | DVU_0466 | Para-aminobenzoate/anthranilate synthase glutamine amidotransferase; Identified by similarity to SP:P28819; match to protein family HMM PF00117. | Anthranilate synthase, glutamine amidotransferase component; Identified by similarity to SP:Q08654; match to protein family HMM PF00117; match to protein family HMM TIGR00566. | 0.831 |
page 1 of 6