Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0519 | DVU_0520 | DVU_0519 | DVU_0520 | Flagellar hook-associated protein FlgK, putative; Identified by similarity to SP:P33235; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family. | Flagellar hook-associated protein FlgL, putative; Identified by match to protein family HMM PF00669; match to protein family HMM PF02012. | 0.997 |
| DVU_0519 | DVU_0862 | DVU_0519 | DVU_0862 | Flagellar hook-associated protein FlgK, putative; Identified by similarity to SP:P33235; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family. | Flagellar protein FliS/hypothetical protein, fusion; Identified by similarity to SP:P26608; match to protein family HMM PF02561; match to protein family HMM TIGR00208. | 0.991 |
| DVU_0519 | DVU_1442 | DVU_0519 | DVU_1442 | Flagellar hook-associated protein FlgK, putative; Identified by similarity to SP:P33235; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family. | Flagellin FlaG, putative; Identified by similarity to GP:2384651. | 0.709 |
| DVU_0519 | DVU_2082 | DVU_0519 | DVU_2082 | Flagellar hook-associated protein FlgK, putative; Identified by similarity to SP:P33235; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family. | Flagellin, putative; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.942 |
| DVU_0519 | DVU_2444 | DVU_0519 | DVU_2444 | Flagellar hook-associated protein FlgK, putative; Identified by similarity to SP:P33235; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.943 |
| DVU_0519 | csrA | DVU_0519 | DVU_0521 | Flagellar hook-associated protein FlgK, putative; Identified by similarity to SP:P33235; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family. | Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.913 |
| DVU_0519 | flgB | DVU_0519 | DVU_0316 | Flagellar hook-associated protein FlgK, putative; Identified by similarity to SP:P33235; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.976 |
| DVU_0519 | fliE | DVU_0519 | DVU_0314 | Flagellar hook-associated protein FlgK, putative; Identified by similarity to SP:P33235; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family. | Flagellar basal body component FliE; Identified by similarity to SP:P24502; match to protein family HMM PF02049; match to protein family HMM TIGR00205. | 0.971 |
| DVU_0519 | fliM | DVU_0519 | DVU_0910 | Flagellar hook-associated protein FlgK, putative; Identified by similarity to SP:P33235; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family. | Flagellar motor switch protein FliM; Identified by similarity to SP:P06974; match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397. | 0.984 |
| DVU_0519 | fliW | DVU_0519 | DVU_0522 | Flagellar hook-associated protein FlgK, putative; Identified by similarity to SP:P33235; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family. | Conserved hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. Belongs to the FliW family. | 0.957 |
| DVU_0520 | DVU_0519 | DVU_0520 | DVU_0519 | Flagellar hook-associated protein FlgL, putative; Identified by match to protein family HMM PF00669; match to protein family HMM PF02012. | Flagellar hook-associated protein FlgK, putative; Identified by similarity to SP:P33235; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family. | 0.997 |
| DVU_0520 | DVU_0862 | DVU_0520 | DVU_0862 | Flagellar hook-associated protein FlgL, putative; Identified by match to protein family HMM PF00669; match to protein family HMM PF02012. | Flagellar protein FliS/hypothetical protein, fusion; Identified by similarity to SP:P26608; match to protein family HMM PF02561; match to protein family HMM TIGR00208. | 0.995 |
| DVU_0520 | DVU_1442 | DVU_0520 | DVU_1442 | Flagellar hook-associated protein FlgL, putative; Identified by match to protein family HMM PF00669; match to protein family HMM PF02012. | Flagellin FlaG, putative; Identified by similarity to GP:2384651. | 0.692 |
| DVU_0520 | DVU_2082 | DVU_0520 | DVU_2082 | Flagellar hook-associated protein FlgL, putative; Identified by match to protein family HMM PF00669; match to protein family HMM PF02012. | Flagellin, putative; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.930 |
| DVU_0520 | DVU_2444 | DVU_0520 | DVU_2444 | Flagellar hook-associated protein FlgL, putative; Identified by match to protein family HMM PF00669; match to protein family HMM PF02012. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.806 |
| DVU_0520 | csrA | DVU_0520 | DVU_0521 | Flagellar hook-associated protein FlgL, putative; Identified by match to protein family HMM PF00669; match to protein family HMM PF02012. | Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.909 |
| DVU_0520 | flgB | DVU_0520 | DVU_0316 | Flagellar hook-associated protein FlgL, putative; Identified by match to protein family HMM PF00669; match to protein family HMM PF02012. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.979 |
| DVU_0520 | fliE | DVU_0520 | DVU_0314 | Flagellar hook-associated protein FlgL, putative; Identified by match to protein family HMM PF00669; match to protein family HMM PF02012. | Flagellar basal body component FliE; Identified by similarity to SP:P24502; match to protein family HMM PF02049; match to protein family HMM TIGR00205. | 0.928 |
| DVU_0520 | fliM | DVU_0520 | DVU_0910 | Flagellar hook-associated protein FlgL, putative; Identified by match to protein family HMM PF00669; match to protein family HMM PF02012. | Flagellar motor switch protein FliM; Identified by similarity to SP:P06974; match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397. | 0.957 |
| DVU_0520 | fliW | DVU_0520 | DVU_0522 | Flagellar hook-associated protein FlgL, putative; Identified by match to protein family HMM PF00669; match to protein family HMM PF02012. | Conserved hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. Belongs to the FliW family. | 0.970 |
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