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DVU_0525 DVU_0525 DVU_0526 DVU_0526 DVU_0949 DVU_0949 DVU_0102 DVU_0102 DVU_0567 DVU_0567 DVU_0079 DVU_0079 DVU_0099 DVU_0099 DVU_0100 DVU_0100 maF maF DVU_0528 DVU_0528 DVU_0063 DVU_0063
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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DVU_0525Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. (222 aa)    
Predicted Functional Partners:
DVU_0526
Drug resistance transporter, putative; Identified by similarity to OMNI:NTL02MA1611.
  
  
 0.784
DVU_0949
Conserved domain protein; Identified by similarity to OMNI:NMB1475.
  
  
 0.641
DVU_0102
Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297.
  
  
 0.615
DVU_0567
Identified by match to protein family HMM PF03741.
     
 0.598
DVU_0079
ZIP zinc transporter family protein; Identified by similarity to SP:Q06916; match to protein family HMM PF02535.
  
  
 0.594
DVU_0099
TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
   
  
 0.588
DVU_0100
TonB-dependent receptor; Identified by match to protein family HMM PF00593.
   
  
 0.559
maF
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
    0.530
DVU_0528
Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
  
    0.528
DVU_0063
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
  
     0.518
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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